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Vol 62, No 7 (2017)

Structure of Inorganic Compounds

Synthesis, Structure, and Fluorescence of a Novel Cadmium Compound

Yao Z., Chen W.

Abstract

A novel cadmium compound, [(CdI3)22-I)]2(Me2-4,4'-H2bipy)3 (1) (Me = methyl; 4,4'-bipy = 4,4'-bipyridine) with the Me2-4,4'-H2bipy moiety generated in situ, has been prepared through a solvothermal reaction and structurally characterized by X-ray single crystal diffraction analysis. Compound 1 is characterized by an isolated structural motif, consisting of [(CdI3)22-I)]3– anions and Me2-4,4'-H2bipy2+ cations. The [(CdI3)22-I)]3– anions and Me2-4,4'-H2bipy2+ cations interconnect together via C–H···I hydrogen-bonding interactions to complete a three-dimensional (3D) supramolecular network. Solid state fluorescent spectrum reveals an emission band in the violet region.

Crystallography Reports. 2017;62(7):1017-1021
pages 1017-1021 views

New Diphosphopentamolybdate K5[HP2Mo5O23] · 10H2O: Synthesis, Structure, and Characterization

Harchani A., Haddad A.

Abstract

A new diphosphopentamolybdate(VI) K5[HP2Mo5O23] · 10H2O has been prepared employing solution method and characterized by single crystal X-ray diffraction, energy dispersive analysis, infrared spectroscopy, thermal stability analysis, cyclic voltammetry analysis, and ultraviolet visible spectroscopy. The compound crystallizes in the orthorhombic sp. gr. Pcab: a = 15.9661(10) Å, b = 19.0832(10) Å, c = 20.0970(9) Å, V = 6123.27(10) Å3, Z = 8. The crystal structure contains the polyanion units [HP2Mo5O23]5– around the potassium cations and lattice water. The [HP2Mo5O23]5– subunits are connected together through K−O−Mo bridges and hydrogen bonds. The crystal shape morphology was simulated using the Bravais–Friedel–Donnay–Harker model.

Crystallography Reports. 2017;62(7):1022-1027
pages 1022-1027 views

The Effect of Vanadium on Morphology and Chemical Composition of Carbides in High Alloyed Chromium–Molybdenum Steels

Pejović B., Todić T., Čamagić I., Todić A.

Abstract

Despite of the permanent progress of technique and finding of the new, modern materials that successfully replace metals, steel continues to play an important role in the technical practice. The tendency is to discover the new alloys with better mechanical and technological characteristics, compared to conventional and standard types of steels. High-alloyed Cr–Mo steel, with a high content of Vanadium is the new type of wear resistant material, with high hardness and satisfactory impact and fracture toughness. During the solidification process Vanadium, as a strong carbide forming element, creates a network of M7C3 type carbide grains around the metal matrix, while in the matrix, the finely dispersed V6C5 type carbides are formed. In this paper, the chemical composition and morphology have been studied of carbides and the other phases present in the metal matrix in 1.4 wt % C, 12 wt % Cr, 1.0 wt % Mo steels with additions up to 3.0 wt % V. Experimental results indicate that Vanadium affects the solidification process in high Chromium steel. Vanadium is distributed between eutectic M7C3 carbide and the matrix, but its content in carbides is considerably higher. Vanadium changed the microstructure parameters of phases present in the structure of alloys, including volume fraction, size and morphology.

Crystallography Reports. 2017;62(7):1028-1034
pages 1028-1034 views

Structure of Organic Compounds

Synthesis, Crystal Structure, and Free Radical Scavenging Activity of 4-Aminopyridinium 3,5-Dinitrobenzoate

Vijayakumar A., Arjun P., Sinthiya A., Duraipandiyan V., Al-Dhabi N.A.

Abstract

The crystal structure of 4-aminopyridinium 3,5-dinitrobenzoate, C12H10O6N4, has been determined by single-crystal X-ray diffraction technique. The title compound crystallizes in the monoclinic sp. gr. P21/n with the unit cell parameters: a = 7.4726(3) Å, b = 23.0898(9) Å, c = 8.0744(4) Å, V = 1338.64(10) Å3, Z = 4. The asymmetric unit of the compound consists of one 3,5-dinitrobenzoate anion and 4-aminopyridine cation. The adjacent anions and cations are linked through two N−H···O hydrogen bonds, N2−H2A···O5 and N2−H2B···O6, to form an infinite chain of anions and cations, extended along the [010] direction.

Crystallography Reports. 2017;62(7):1035-1040
pages 1035-1040 views

A Novel Coordination Polymer Based on Trinuclear Cobalt Building Blocks Cluster: Synthesis, Crystal Structure, and Properties

Lu J.F., Tang Z.H., Shi J., Ge H.G., Jiang M., Song J., Jin L.X.

Abstract

The title compound {[Co33-OH)(μ2-H2O)2(H2O)5(BTC)2] · 6H2O}n (H3BTC is a 1,3,5-benzenetricarboxylic acid) was prepared and characterized by single crystal and powder X-ray diffraction, Fourier transform infrared spectroscopy, thermogravimetric and elemental analyses. The single crystal X-ray diffraction reveals that the title compound consists of 1D infinite zigzag chains which were constructed by trinuclear cobalt cluster and BTC3– ligand. Neighbouring above-mentioned 1D infinite zigzag chains are further linked by intermolecular hydrogen bonding to form a 3D supermolecular structure. In addition, the luminescent properties of the title compound were investigated.

Crystallography Reports. 2017;62(7):1041-1045
pages 1041-1045 views

Synthesis, Crystal Structure, and Luminescent Properties of Ag(I) Coordination Polymer with Tricarboxylic Acid and Flexible N-donor Ligand

Lu J.F., Xu Y.H., Li P.A., Jin L.X., Zhao C.B., Guoand X.H., Ge H.G.

Abstract

The reaction of AgNO3 with combinations of 1,3-bis(4-pyridyl)propane (bpp) and 1,3,5-benzenetricarboxylic acid (H3btc) in aqueous alcohol/ammonia at room temperature produces crystals of {[Ag6(H2O)2(bpp)6] · (btc)2 · 25H2O}n (Ι). Single crystal X-ray diffraction analysis reveals that the complex Ι consists of 1D infinite cationic chains of [Ag(bpp)]nn+ and [Ag(H2O)(bpp)]nn+ which are further linked into the cation layer of [Ag(bpp)]nn+ by Ag···π interactions. The noncoordinated btc3− serves as template driving surrounding water molecules to aggregate into the anionic water layer. The neighboring anionic water layer and cationic layer were further alternately joined into a 3D sandwich-like framework by hydrogen bonding. In addition, the luminescent properties of Ι were investigated.

Crystallography Reports. 2017;62(7):1046-1050
pages 1046-1050 views

Synthesis, Crystal Structure, and Biological Activity of 1,3,5-Thimethyl-2,4,6-tris(3'-methyl-1'-imidazoliomethylene)Benzene Perchlorate

Lu J., Zhao C., Shi J., Jin L., Hua G., Ge H.

Abstract

The title compound, C24H33Cl3N6O12(ClO4)3, was synthesized and structurally characterized by elemental analysis, IR, MS, HMR and single crystal X-ray diffraction. The crystals are triclinic, sp. gr. P1, Z = 2. The crystal structure is stabilized by C–H···O hydrogen-bonds forming a three-dimensional network. The preliminary biological test showed that the title compound had anti-Mycobacterium phlei 1180 activity.

Crystallography Reports. 2017;62(7):1051-1054
pages 1051-1054 views

A Novel Coordination Polymer Constructed by Hetero−Metal Ions and 2,3-Pyridine Dicarboxylic Acid: Synthesis and Structure of [NiNa2(PDC)2(μ-H2O)(H2O)2]n

Dou M., Lu J.

Abstract

A novel coordination polymer containing hetero-metal ions, [NiNa2(PDC)2(μ-H2O)(H2O)2]n, where PDC is 2,3-pyridine dicarboxylate ion, has been synthesized. In the structure, the PDC ligand chelates and bridges two Ni(II) and two Na(I) centers. Two kinds of metal centers are connected by μ4-PDC and μ2-H2O to form 2D coordination layers. Hydrogen bonds between coordination water molecules and carboxylate oxygen atoms further link these 2D coordination layers to form 3D supramolecular network.

Crystallography Reports. 2017;62(7):1055-1059
pages 1055-1059 views

Synthesis and Crystal Structure of Dibromido{2-[(4-tert-butylmethylphenyl) iminomethyl]pyridine-κ2N,N'}Zinc

Khalaj M., Ghazanfarpour-Darjani M., Seftejani F.B., Lalegani A.

Abstract

The title compound [Zn(dip)Br2] was synthesized using the Schiff base bidentate ligand (E)-4-tert-butyl-N-(pyridine-2-ylmethylene)benzeneamine (dip) and zinc(II) bromide salts. It has been characterized by elemental analysis, X-ray diffraction, and optical spectroscopy. The X-ray diffraction analysis demonstrates that in this structure, the zinc(II) ion is located on an inversion center and exhibits a ZnN2Br2 tetrahedral geometry. In this structure the dip ligand is coordinated with zinc(II) ion in a cyclic-bidentate fashion forming a five-membered metallocyclic ring. The compound crystallizes in the monoclinic sp. gr. P21/m with a = 9.2700(13) Å, b = 7.6128(11) Å, c = 12.3880(17) Å, and β = 97.021(3)°.

Crystallography Reports. 2017;62(7):1060-1062
pages 1060-1062 views

Synthesis and Crystal Structure of Di-μ-chlorido-bis{chlorido[4-ethyl-N-(pyridin-2-ylmethylidene-κN)aniline-κN]mercury(II)}

Khalaj M., Seftejani F.B., Ghazanfarpour-Darjani M., Lalegani A.

Abstract

The centrosymmetric dinuclear title complex [Hg2Cl4(dip)2] was synthesized using the Schiff base bidentate ligand (E)-4-ethyl-N-(pyridine-2-ylmethylene)benzeneamine (dip) and mercury(II) chloride salts. It has been characterized by elemental analysis, X-ray diffraction, and UV-Visible and infrared spectroscopic techniques. The X-ray analysis shows that the title compound crystallizes in the monoclinic sp. gr. P21/n, Z = 2 with a = 7.8233(17) Å, b = 15.178(3) Å, c = 12.559(3) Å, β = 97.021(3)°. The Hg(II) ion has a distorted trigonal–bipyramidal coordination environment formed by the bischelating N-heterocyclic ligands, two bridging Cl atoms and one terminal Cl atom.

Crystallography Reports. 2017;62(7):1063-1065
pages 1063-1065 views

Synthesis and Crystal Structure of 7,8,9,10-Tetrahydro-2-bromo-cyclohepta[b]indol-6(5H)-one

Amuthavalli A., Edison D., Prakash B., Sivaramkumar M.S., Velmurgan R.

Abstract

The title compound, C13H12BrNO, was synthesized and characterised by IR, 1H and 13C NMR spectroscopy. The proposed structure was confirmed by single crystal X-ray diffraction. The single crystal data revealed that the compound crystallizes in the triclinic system, sp. gr. P1, with Z = 2. The sevenmembered ring exhibits a slightly distorted envelope conformation. N–H···O hydrogen bonds form a centrosymmetric dimer, these interactions create a stair-like chain of molecules that interacts only loosely with neighbouring chains via van der Waals interactions, and C–H···π contacts are found in the crystal structure.

Crystallography Reports. 2017;62(7):1066-1070
pages 1066-1070 views

Synthesis, Characterization, and Crystal Structures of 4,6-Dimethoxy-2-hydroxy-3-methylbenzoic Acid and 2,4-Dimethoxy-6-hydroxy-3-methylbenzoic Acid

Chantrapromma K., Chantrapromma S., Suttirak R., Ruanwas P., Boonnak N., Fun H.

Abstract

A synthetic route involving 4,6-dimethoxy-2-hydroxy-3-methylbenzoic acid (10) and 2,4-dimethoxy-6-hydroxy-3-methylbenzoic acid (11) has been investigated in the process of synthesis of the natural lichen substance namely, crocynol. Crystal structures of 10 and 11 were determined to confirm the ambiguous structures of the two isomers. Crystals 10 are monoclinic, sp. gr. P21/m, Z = 2. Crystals 11 are monoclinic, sp. gr. P21/c, Z = 4. In the crystal packing of 10, the molecules are arranged into chains along the a-axis formed only by van der Waals interactions, whereas in 11, the molecules are linked by O–H···O and C–H···O hydrogen bonds into chains along the b-axis and further stacked by π···π interactions with the centroid ···centroid distance of 3.6863(8) Å.

Crystallography Reports. 2017;62(7):1071-1077
pages 1071-1077 views

Crystal and Molecular Structure of 3,5-Diphenyl-4,5-dihydro-2-phenylcarboxamide-1H-pyrazole

Tanak H., İlhan İ.Ö., Dege N., Akın N., Sarıpınar E.

Abstract

Crystal structure of the title compound C22H19N3O is determined by single crystal X-ray diffraction (sp. gr. P21/c, Z = 4). The molecule as a whole, is not planar: phenyl cycles are rotated relative to the plane of pyrazole ring. N−H···N intramolecular hydrogen bond forms five-membered ring fused to pyrazole ring. There are also intramolecular C−H···O and C−H···π interactions. Intermolecular C−H···O hydrogen bond links the molecules into a C(7) chain along the a axis. The crystal structure is stabilized also by C–H···π and π···π intermolecular hydrogen bonds.

Crystallography Reports. 2017;62(7):1078-1082
pages 1078-1082 views

Tetraphenylborate Salt of Atropine®: Synthesis and X-ray Structure of Tetraphenyl-λ4-borane, (1R,3r,5S,8s)-3-((3-Hydroxy-2-phenylpropanoyl)oxy)-8-methyl-8-azabicyclo[3.2.1]octan-8-ium Salt

Mostafa G.A., Ghabbour H.A., Abdel-Aziz H.A.

Abstract

The title compound, tetraphenylborate salt of atropine (RS)-(8-Methyl-8-azabicyclo[3.2.1]oct-3-yl) 3-hydroxy-2-phenylpropanoate tetraphenylborate salt, was prepared by the reaction of (RS)-(8-Methyl-8-azabicyclo[3.2.1]oct-3-yl) 3-hydroxy-2-phenylpropanoate sulfate (2:1) salt with sodium tetraphenylborate in deionized water at ambient temperature through anion exchange reaction. Colorless crystals of the title compound suitable for X-ray structural analysis were obtained by slow evaporation from acetonitrile. The title compound crystallizes in the triclinic sp. gr. P1 with a = 9.7989(5) Å, b = 9.8203(5) Å, c = 18.6099(9) Å, α = 81.356(2)°, β = 80.616(2)°, γ = 67.704(2)°, V = 1627.05(14) Å3, Z = 2.

Crystallography Reports. 2017;62(7):1083-1088
pages 1083-1088 views

X-ray and Theoretical Studies of 2-((5-Amino-1,3,4-thiadiazol-2-yl)thio)-1-phenylethanone

Ustabaş R., Çoruh U., Er M., Tahtaci H.

Abstract

The crystal structure of 2-((5-amino-1,3,4-thiadiazol-2-yl)thio)-1-phenylethanone was determined by X-ray diffraction method. The compound crystallizes in orthorhombic crystal system, sp. gr. Pbca. The atoms that constitute thiadiazole and phenyl rings do not form any significant deviation from the ring planes. Compound has two intermolecular N–H···N hydrogen bonds and one C–H···π interaction. Using DFT/B3LYP method with 6-31G(d), 6-311G(d), 6-311G(d, p), and 6-311++G(d, p) basis sets, the molecular geometry of the compound was optimised. Bond lenghts, bond angles, torsion angles, dihedral angles, and HOMO–LUMO were calculated from the optimised geometry of the compound. The results obtained by X-ray diffraction method were compared with the results obtained through four different basis sets. Total energy of the molecule was calculated for four different basis sets.

Crystallography Reports. 2017;62(7):1089-1094
pages 1089-1094 views

Structure of (2E)-Ethyl 2-((4-(cyanomethoxy)benzylidene)hydrazono)-3,4-dimethyl-2,3-dihydrothiazole-5-carboxylate Studied by X-ray and DFT Calculations

Ustabaş R., Er M., Tahtaci H., Çoruh U.

Abstract

The molecular structure of (2E)-ethyl 2-((4-(cyanomethoxy)benzylidene)hydrazono)-3,4-dimethyl-2,3-dihydrothiazole-5-carboxylate was determined using X-ray diffraction. The crystals are triclinic: sp. gr. P1; Z = 2; the unit cell parameters a = 8.4747(7) Å, b = 8.9382(8) Å, c = 11.9913(10) Å. The title compound has two C–H···O type intramolecular hydrogen bonds, one C–H···O and one C–H···N type intermolecular hydrogen bonds. For theoretical calculations, the molecular structure was investigated by DFT/B3LYP method with 6-311G(d) and 6-311G(d, p) basis sets. The calculated and experumental results (bond lenghts, bond angles, and dihedral angles) were compared with each other. Total energy, dipole moment, and mulliken atomic charges were calculated using two different basis sets.

Crystallography Reports. 2017;62(7):1095-1098
pages 1095-1098 views

Bromination of 1,2,3,4-Tetrahydro-1,10-phenanthroline: Synthesis and Crystal Structure of 6-Bromo-1,2,3,4-tetrahydro-1,10-phenanthroline and Its Bromide Salt

Su H.P., Yi H.P., Xiaofeng J.S., Song B.H., Chen S.P.

Abstract

The bromination reaction of 1,2,3,4-tetrahydro-1,10-phenanthroline (tphen) is investigated, which can afford a new heterocyclic compound, namely 6-bromo-1,2,3,4-tetrahydro-1,10-phenanthroline (1). The bromide salt of 1, i.e., 1 · (1H) · Br (2), can be isolated from the bromination system. The accurate structures of both compounds are confirmed and investigated by single-crystal X-ray diffraction. The result proves that the bromination reaction of tphen mainly affords its C6-substituted product. In compounds 1 and 2, the N−H···Br hydrogen bonds play an important role in intermolecular connection. Crystal data of 1: Monoclinic system, sp. gr. Pc, a = 4.6628(8) Å, b = 8.7980(15) Å, c = 13.1347(19) Å, β = 101.342(5)°, Z = 2, V = 528.31(15) Å3. Crystal data of 2: Monoclinic system, sp. gr. P21/n, a = 16.6171(16) Å, b = 7.8323(8) Å, c = 18.6972(18) Å, β = 113.597(2)°, Z = 4, V = 2230.0(4) Å3.

Crystallography Reports. 2017;62(7):1099-1103
pages 1099-1103 views

Synthesis, Spectroscopy, and α-Glucosidase Inhibitory Activity of 3-Substituted Hydrazone Derivatives and Crystal Structure of (1E,2E)-1,2-Bis[1-(3-methoxyphenyl)ethylidene]hydrazone

Boonnak N., Chantrapromma S., Ruanwas P., Sontimuang C., Fun H.

Abstract

Six 3-substituted hydrazone derivatives [R = −OCH3 (1), −NH2 (2), −NO2 (3), −F (4), −Cl (5), and −Br (6)] were synthesized by condensation reaction. Their structures were elucidated by 1H NMR, FT-IR and UV-Vis spectroscopy. The synthesized compounds were further evaluated for their α-glucosidase inhibitory activity. Strong activity was found for 1 and 3. The crystal structure of 1 was determined by single crystal X-ray diffraction: a = 6.9743(1) Å, b = 18.3627(3) Å, c = 12.0207(2) Å, β = 96.087(1)o, sp. gr. P21/c, Z = 4. The molecule of 1 is twisted with the dihedral angle between the two phenyl rings being 51.91(4)°. In the crystal packing, the molecules are linked into chains by C–H···π interactions.

Crystallography Reports. 2017;62(7):1104-1108
pages 1104-1108 views

Synthesis and Crystal Structure of a Four-coordinated Cobalt Complex with 1-Methylbenzimidazole

Sun S., Wang G., Wang Y., Zhang W., Qin J., Liu Z., Sun S., Gao X., Meng L.

Abstract

A four-coordinated complex, L2Co(NCO)2, (L = 1-methylbenzimidazole) has been synthesized and characterized by IR spectroscopy, elemental analyses, and single crystal X-ray diffraction. The crystal is monoclinic, a = 14.522(2) Å, b = 14.610(2) Å, c = 8.6850(13) Å, β = 92.037(3)°, Z = 4, sp. gr. P21/c. Bond lengths Co–N(L) are equal to 2.0165(16) and 2.0174(15) Å, Co–O(NCO) are 1.944(2) and 1.945(2) Å. Intermolecular C–H···O, C–H···N, and C–H···π interactions link the molecules into three-dimensional networks in the crystal.

Crystallography Reports. 2017;62(7):1109-1112
pages 1109-1112 views

Crystal Structure of Two V-shaped Ligands with N-Heterocycles

Wang G., Sun S., Zhang X., Sun S.

Abstract

Two V-shaped ligands with N-heterocycles, bis(4-(1H-imidazol-1-yl) phenyl)methanone (1), and bis(4-(1H-benzo[d]imidazol-1-yl)phenyl)methanone (2) have been synthesized and characterized by elemental analyses, IR and 1H NMR spectroscopy. Crystal structures of 1 and 2 have been determined by X-ray diffraction. The crystal of 1 is monoclinic, sp. gr. P21/c, Z = 4. The crystal of 2 is orthorhombic, sp. gr. Fdd2, Z = 8. X-ray diffraction analyses show that the V-shaped angles of 1 and 2 are 122.72(15)° and 120.7(4)°, respectively. Intermolecular C–H···O, C–H···N, C–H···π, and π···π interactions link the components into three-dimensional networks in the crystal structures.

Crystallography Reports. 2017;62(7):1113-1117
pages 1113-1117 views

Synthesis and Structural Analysis of 2-Cyanophenyl Phenacyl Ether

Barim E., Sevinçek R., Kırılmış C.

Abstract

Molecular and crystal structure of 2-cyanophenyl phenacyl ether, C15H11O2N, have been determined by single crystal X-ray diffraction study. The title compound is monoclinic, with a = 4.4334(4) Å, b = 10.7677(11) Å, c = 12.7779(11) Å, β = 99.806(8)°, Z = 2, sp. gr. P21. The crystal structure is stabilized by C–H···O inter-molecular interactions. In order to clarify the electron delocalization on the whole molecule and determine the active sites of the title compound, DFT calculations and NBO analysis were performed.

Crystallography Reports. 2017;62(7):1118-1121
pages 1118-1121 views

Experimental (X-ray, FT-IR, and UV-Vis Spectroscopy) and Theoretical Methods (DFT Study) of N'-(Dipyridin-2-ylmethylene)-4-methylbenzenesulfonohydrazide

Aydın E.M., Çınarlı M., Batı H., Çalışkan N., Ataol Ç.Y.

Abstract

A new hydrazone derivative was synthesized and characterized by IR, UV-Vis spectroscopy, elemental analysis and single-crystal X-ray diffraction. The compound was established to reveal antibacterial activity. The compound (C18H16N4O2S) crystallizes in monoclinic crystal system with C2/c space group. The molecular structure is stabilized by a C–H···O intermolecular hydrogen bond. Quantum chemical calculations based on DFT/B3LYP/6-31G(d, p) were carried out and the results were compared with the experimental data. The calculated vibrational frequencies were used to determine the types of molecular motions associated with each of the observed experimental bands. UV-Vis absorption spectra of the compound calculated by TD-DFT have been ascribed to their corresponding molecular structure and electron transitions.

Crystallography Reports. 2017;62(7):1122-1127
pages 1122-1127 views

Condensation Reaction of 1,2,3,4-Tetrahydro-1,10-phenanthroline and Formaldehyde: Synthesis and Crystal Structures of Bis(1,2,3,4-tetrahydro-1,10-phenanthroline-6-yl)methane and Its p-Toluenesulfonate Salt

Xiaofeng J.S., Yi H.P., Mo Z.L., Chen S.P.

Abstract

A new heterocyclic compound, bis(1,2,3,4-tetrahydro-1,10-phenanthroline-6-yl) methane (1), was obtained by the condensation reaction of 1,2,3,4-tetrahydro-1,10-phenanthroline (tphen) and formaldehyde (HCHO). The p-toluenesulfonate salt of 1, (ptsa)2 · (1H2) (2, ptsaH = p-toluenesulfonic acid), is also synthesized and characterized. Cystal structures of 1 and 2 are determined by X-ray single crystal diffraction. The molecules of 1 form a 1D helix supramolecular chain by weak N−H···N hydrogen bonds, while in crystal 2, the 1H22+ cations and ptsa- anions are alternately connected by strong N−H···O hydrogen bonds and generate a 1D zigzag supramolecular chain. The result also proves that the condensation reaction of tphen can provide its C6 condensation product with high regioselectivity.

Crystallography Reports. 2017;62(7):1128-1134
pages 1128-1134 views

The First Seven-Coordinated Triiodo Complex of Rhenium(III)

Schoultz X., Gerber T.I., Betz R., Hosten E.C.

Abstract

The reaction of cis-[ReO2I(PPh3)2] with tert-butyl isocyanide in benzene led to the isolation of the complex [ReI3(CN-t-Bu)3(PPh3)] (1). The complex is unusual since it contains bulky ligands with large cone angles, i.e. three iodides, three isocyanides with tert-butyl groups and a triphenylphosphine as ligands in a seven-coordinate geometry around the rhenium(III) metal ion.

Crystallography Reports. 2017;62(7):1135-1137
pages 1135-1137 views

Hydrothermal Synthesis and Characterization of a New Strandberg-type Diphosphopentamolybdate (C6N3H18)2[P2Mo5O23] · 6H2O

Ftini M.M.

Abstract

An inorganic-organic hybrid material formulated as (C6N3H18)2[P2Mo5O23] · 6H2O, has been hydrothermally synthesized and characterized by single crystal X-ray diffraction technique, IR spectrum, thermogravimetric analysis and UV-visible spectroscopy. The structure consists of diphosphopentamolybdate Strandberg type polyoxoanions [P2Mo5O23]6–, protonated 1-(2-aminoethyl)piperazine cations and six crystallization water molecules. These anions are connected with the organic amine through hydrogen bonding interactions between the hydrogen atoms of the organic molecules and the oxygen atoms of the polyoxoanion and water molecules which generate a three-dimensional network.

Crystallography Reports. 2017;62(7):1138-1143
pages 1138-1143 views

Single Crystal X-ray Study of 6-Phenyl-4-(p-tolyl)pyridin-2(1H)-one

Khajuria R., Sharma S., Kapoor K.K., Gupta V.K.

Abstract

The title compound 6-phenyl-4-(p-tolyl)pyridin-2(1H)-one was synthesized via one-pot, three component reaction of (E)-1-phenyl-3-(p-tolyl)-2-propen-1-one, ethyl 2-nitroacetate and ammonium acetate in refluxing ethanol, as a shiny green crystalline solid in 83% yield. Its structure was characterized by spectral studies and unambiguously corroborated by X-ray diffraction crystallography. The crystals of title compound are monoclinic, sp. gr. P21/n, a = 11.8346(7) Å, b = 13.4413(9) Å, c = 17.7626(10) Å, β = 99.479(5)°, and Z = 8. All the rings in molecule of the title compound are planar. Hydrogen interactions play significant role in stabilizing the crystal structure and the supramolecular aggregate of molecules is facilitated by strong N–H···O and C–H···O type of hydrogen interactions.

Crystallography Reports. 2017;62(7):1144-1147
pages 1144-1147 views

Synthesis and Molecular Structure of 2-(4-Chlorophenyl)-3-(phenyl-amino)-5-(thiophen-2-ylmethylidene)-3,5-dihydro-4H-imidazol-4-one

Sharma D.K., Subbulakshmi K.N., Narayana B., Sarojini B.K., Anthal S., Kant R.

Abstract

2-(4-Chlorophenyl)-3-(phenylamino)-5-(thiophen-2-ylmethylidene)-3,5-dihydro-4H-imidazol-4-one, C20H14N3OSCl was synthesized and its crystal structure was determined by single crystal X-ray diffraction. The crystals are triclinic, sp. gr. P1, Z = 2. All three rings are planar, and imidazole ring is almost perpendicular to the phenyl ring with the dihedral angle of 88.65(2)°. In the crystal, pairs of O–H···O hydrogen bonds link molecules into inversion dimers, featuring R22(10) graph set motif. Crystal structure is further stabilized by π···π interactions.

Crystallography Reports. 2017;62(7):1148-1151
pages 1148-1151 views

Crystal Growth and Structural Characterization of a Thiocyanato-Bridged Copper(I/II) Mixed-Valence Coordination Polymer

Krichen F., Walha S., Kabadou A.

Abstract

A new mixed-valence coordination polymer [Cu3(SCN)4(DMSO)2]n (SCN = thiocyanato and DMSO = dimethyl sulfoxide) was prepared and characterized by single crystal X-ray diffraction method. The in situ formation of thiocyanate during the synthesis induces reduction of a part of Cu(II) to Cu(I). The three-dimensional structure of the binuclear thiocyanato bridged compound provided an example of pseudohalide materials containing two different environments for both copper centers.

Crystallography Reports. 2017;62(7):1152-1156
pages 1152-1156 views

Synthesis and Crystal Structure of a Chalcone Derivative

Singh V.D., Salian V.V., Narayana B., Sarojini B.K., Kamni ., Anthal S., Kant R.

Abstract

(2E)-3-(anthrance-9-yl)-1-(3,4-dichlorophenyl)prop-2-en-1-one [C23H14OCl2] is synthesized and its crystal structure is determined by single X-ray diffraction. There exist two molecules in the asymmetric unit. The dihedral angle between the benzene and anthracene moiety of the molecule A and B is 86.51(12)° and 76.42(13)°, respectively. No classical hydrogen bonds are observed and only van der Waals forces stabilize the crystal packing.

Crystallography Reports. 2017;62(7):1157-1159
pages 1157-1159 views

Hydrothermal Synthesis, Crystal Structure, and Photoluminescent Properties of Li[UO2(CH3COO)3]3[Co(H2O)6]

AlDamen M.A., Juwhari H.K., Al-zuheiri A.M., Alnazer L.A.

Abstract

Single crystal of Li[UO2(CH3COO)3]3[Co(H2O)6] was prepared and found to crystallize in the monoclinic crystal system in the sp. gr. C2/c, with Z = 2, and unit cell parameters a = 22.1857(15) Å, b = 13.6477(8) Å, c = 15.6921(10) Å, β = 117.842(9)°, V = 4201.3(4) Å3. The crystal was characterized by X-ray diffraction, Fourier transform infrared spectroscopy, and differential scanning calorimetry. The single crystal X-ray diffraction analysis revealed that the crystal has a lamellar structure in which a cobalt hydrate is sandwiched within the Li[UO2(CH3COO)3]32- chains. Furthermore, the room temperature photoluminescence spectrum of the complex was investigated in the solid state.

Crystallography Reports. 2017;62(7):1160-1164
pages 1160-1164 views

Highly Efficient and Simple Route to Synthesize N-(4-Acetylphenyl)-4-chlorobenzenesulfonamide and Its Crystal Structure

Kobkeatthawin T., Chantrapromma S., Chidan Kumar C.S., Fun H.

Abstract

The one-pot synthesis of N-(4-acetylphenyl)-4-chlorobenzenesulfonamide under base conditions is carried out. The present method offers several advantages such as excellent yields, short reaction times and high purity. The chemical structure was elucidated using 1H-NMR, FT-IR and UV-Vis spectroscopy. The crystal structure of the substance was determined by single crystal X-ray structure analysis. The molecule is in a V-shape. The two substituted benzene rings make the dihedral angle of 84.31(9)°. In the crystal packing, the molecules are linked by N–H···O and C–H···O hydrogen bonds into double chains along the b-axis. The crystal is further stabilized by weak C−H···O, C−Cl···π and π···π interactions.

Crystallography Reports. 2017;62(7):1165-1170
pages 1165-1170 views

Structure of Macromolecular Compounds

Preliminary X-Ray Crystallographic Studies of the N-Terminal Domains of Hsp104 from Yeast Candida albicans and Saccharomyces cerevisiae

Wang P., Li J., Sha B.

Abstract

Yeast Hsp104 is an ATP-dependent molecular chaperone, which can solublize and rescue denatured proteins from aggregates into active form by cooperating with Hsp70 and Hsp40 chaperones. Moreover, overexpression of Hsp104 of Saccharomyces cerevisiae (ScHsp104) cures the yeast [PSI+] prion due to the completely dissolution of the prion seeds, demonstrating ScHsp104’s potential to clear amyloid-like protein aggregates, thus making ScHsp104 a promising medication approach for human amyloidogenic neurodegenerative diseases. Because the working mechanisms for ScHsp104’s activities have not been clearly elucidated yet, crystallographic determination of ScHsp104 stands for great significance. Here, the expression, purification and crystallization of the N-terminal domains of Hsp104 from yeast Candida albicans (CaHsp104N) and S. cerevisiae (ScHsp104N) are described. The CaHsp104N crystals diffracted to 1.54 Å and belonged to the sp. gr. P3221 or P3121, with unit cell parameters of a = 55.213 Å, c = 109.451 Å. The data of the ScHsp104N crystals were collected to the resolution of 2.53 Å in the sp. gr. C2, with unit cell parameters a = 148.587 Å, b = 66.255 Å, c = 74.577 Å, β = 107.369°. The phase of ScHsp104N is determined by the molecular replacement method using CaHsp104N as the search model.

Crystallography Reports. 2017;62(7):1171-1176
pages 1171-1176 views

Ligands Entrapment in a 2D Parallel Stacked Co Complex with Mixed Ligands

Qin L., Liu Q., Yang X., Wang Y.

Abstract

The title complex, {[Co4(DPT)4(bdc)4] · DPT · DMF · H2O}n (1) was prepared under hydrothermal condition (dimethylformamide and water) based on mixed ligands, namely, 2,5-dipyridinethiophene (DPT) and 1,4-benzenedicarboxylate (H2bdc). DPT and bdc2– ligands link Co cations to give a 2D layer in the title complex. Each layer is stacked in parallel manners. The title compound has channels running in parallel to the a axis with the dimensions of 3.6 × 6.8 Å2, which entraps a guest DPT ligand molecule.

Crystallography Reports. 2017;62(7):1177-1181
pages 1177-1181 views

Crystal Growth

SEM, Chemical Etching and THz Wave Generation of 4-Dimethylamino-N-methyl-4-stilbazolium Tosylate (DAST) Single Crystals

Sun Q., Teng B., Cao L., Ji S., Zhong D., Hao L., Xu H., Zhao Y.

Abstract

The 4-dimethylamino-N-methyl-4-stilbazolium tosylate (DAST) crystal which was candidate for generating and detecting terahertz (THz) wave was grown by slope nucleation method (SNM). The functional groups of DAST were identified by Fourier Transform Infrared (FTIR) studies. Macroscopic steps and streaks on the (001) face were found by scanning electron microscope (SEM). Different patterns of etch pits under different chemical etchants were studied by optical microscope. Widely tunable THz waves ranging from 0.38 to 18.10 THz were generated from 0.5 mm-thick DAST crystal. The maximum output energy was 345.4 nJ/pulse at 3.39 THz and the conversion efficiency was 8.44 × 10–5.

Crystallography Reports. 2017;62(7):1182-1186
pages 1182-1186 views

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