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卷 12, 编号 1 (2018)

Article

Differences in Production of Adrenal Steroid Hormones in Pubertal Rats Exposed to Low Doses of the Endocrine Disruptor DDT during Prenatal and Postnatal Development

Yaglova N., Tsomartova D., Yaglov V.

摘要

Production of adrenal steroid hormones in pubertal male Wistar rats exposed to low doses of DDT during both prenatal and postnatal and only postnatal development has been investigated. Rats exposed to the disruptor prenatally and postnatally, and only postnatally were characterized by opposite changes in production of mineralocorticoids, glucocorticoids, male and female sex hormones. The study revealed that daily exposure to low doses of DDT enhanced conversion of progesterone to 17-OH-progesterone and did not exert selective antiandrogenic or proestrogenic action typical for the effect of toxic and subtoxic doses. In rats, exposed to DDT during their prenatal and postnatal development, impaired morphogenesis of the adrenal cortex and circulatory disorders in zona glomerulosa contributed to reduced aldosterone and sex steroid hormones production.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):80-86
pages 80-86 views

PCR Analysis of the Absolute Number of Copies of Human Chromosome 18 Transcripts in the Liver and HepG2 Cells

Kiseleva Y., Ptitsyn K., Tikhonova O., Radko S., Kurbatov L., Vakhrushev I., Zgoda V., Ponomarenko E., Lisitsa A., Archakov A.

摘要

Using reverse transcription in conjunction with the quantitative real-time PCR or digital droplet PCR, the transcriptome profiling of human chromosome 18 has been carried out in liver hepatocytes and hepatoblastoma cells (HepG2 cell line) in terms of the absolute number of each transcript per cell. The transcript abundance varied within the range of 0.006 to 9635 and 0.011 to 4819 copies per cell for the HepG2 cell line and hepatocytes, respectively. There was significant correlation between expression profiles of chromosome 18 genes in hepatocytes and HepG2 cells: the Spearman’s correlation coefficient was 0.81. The frequency distribution of transcripts by their abundance was bimodal for HepG2 cells and unimodal for liver hepatocytes. Bioinformatic analysis of the differential gene expression has shown that chromosome 18 genes, overexpressed in HepG2 cells compared to hepatocytes, are associated with cell division and cell adhesion processes. It is suggested that enhanced expression of these genes is related to proliferative activity of cultured HepG2 cells. The differences in transcriptome profiles should be taken into consideration when cultured HepG2 cells are used as a model of liver hepatocytes.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):73-79
pages 73-79 views

Short Oxoproline-Containing Peptides as Potential Pharmacological Means of Hypolipidemic and Antithrombotic Actions

Myasoedov N., Lyapina L., Andreeva L., Obergan T., Grigoryeva M., Shubina T.

摘要

The search and research of pharmacological agents that could combine lipid-lowering and antithrombotic effects on the human organism are one of the most urgent and important tasks of modern biological and medical research. The unique effects of the regulatory peptides of the oxoproline series (5-охо-Pro- His-Pro-NH2, 5-oxo-Pro-Trp-Pro, and 5-oxo-Pro-Arg-Pro or Pyr-His-Pro-NH2, Pyr-Trp-Pro, and Pyr- Arg-Pro) synthesized by the methods of classical peptide chemistry have been found in animals with experimental hypercholesterolemia. Repeated intranasal administration of these peptides to animals with developed hypercholesterolemia increased their anticoagulant, fibrinolytic and antiplatelet potential of the blood and simultaneously lowered increased concentrations of total cholesterol, low-density lipoprotein cholesterol, and triglycerides. In addition, they promoted normalization of blood glucose. A week after the last administration of these peptides, the hypocholesterolemic, normoglycemic and anticoagulant effects persisted. The relationship between the structure of the oxoproline-containing peptides and their functional properties is discussed. It is concluded that further studies of oxoproline-containing peptides are promising in the context of development of pharmacological agents, combining the antithrombotic activity with the improvement of lipid metabolism in the body.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):66-72
pages 66-72 views

The Role of Mitochondrial DNA ORIB Polymorphism in Metabolic Syndrome

Skuratovskaia D., Sofronova J., Zatolokin P., Vasilenko M., Litvinova L., Mazunin I.

摘要

The development of the metabolic syndrome (MS) involves many genes. Certain evidence exists in the literature on the association of polymorphism in the mitochondrial DNA (mtDNA) oriB site, also known as the polycytosine pathway, with the development of insulin resistance, type 2 diabetes mellitus (T2DM) and other metabolic disorders in various ethnic populations. It is suggested that certain polymorphisms at this site are associated with mtDNA copy number in the cell. In this study, using capillary sequencing, we have identified various allelic variants of the mtDNA oriB site in patients with MS (n = 106) and conditionally healthy donors (n = 71). The mtDNA copy number in blood leukocytes was determined by the droplet digital polymerase chain reaction (ddPCR). It has been shown that the variant of the continuous polycytosine tract is significantly more frequent in MS patients with T2DM (p < 0.01). In general, the mtDNA copy number of blood leukocytes was lower in MS patients than in controls. We did not find any correlations between the oriB site variability and the mtDNA copy number.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):59-65
pages 59-65 views

Changes of Chemerin Production in Obese Patients with Different States of Carbohydrate Metabolism

Vasilenko M., Kirienkova E., Skuratovskaia D., Zatolokin P., Mironyuk N., Litvinova L.

摘要

Chemerin is an adipose tissue mediator involved in the regulation of many processes, including lipogenesis, inflammatory responses, etc. The role of chemerin in the development of insulin resistance still needs better understanding. The aim of the study was to investigate chemerin production in obese patients with different states of carbohydrate metabolism. The study included 155 patients with diagnosed obesity and 34 patients with overweight. The control group 1 consisted of 43 conditionally healthy donors without obesity. For comparison of the research data on evaluation of tissue-specific mRNA expression of the genes IL-6, TNF-α, RARRES2, (encoding IL-6, TNF-α, and chemerin, respectively) control group 2 consisting of 30 non-obese was also included into this study. The relative level of mRNA expression of the genes IL-6, TNF-α and RARRES2 (encoding IL-6, TNF-α and chemerin, respectively) was carried out using real time PCR. Concentrations of IL-6, TNF-α, and chemerin were measured in serum/plasma using an enzymelinked immunosorbent assay (ELISA). Significant differences were found in the plasma level of chemerin and tissue-specific patterns of RARRES2 gene expression in obese patients; these changes depended on the degree of obesity and the state of carbohydrate metabolism. Opposite associations between RARRES2 gene expression and expression TNF-α and IL-6 genes have been recognized in adipose tissues of different localization: in obese patients (BMI ≤ 40 kg/m2) without type 2 diabetes mellitus (DM2) they were negative, while in obese patients with DM2 diabetes they were positive. The recognized correlations between the plasma content of chemerin and the expression level of its gene in biopsies with various parameters of carbohydrate and lipid metabolism, and proinflammatory molecules indicate chemerin involvement in metabolic and immune processes in obesity.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):50-58
pages 50-58 views

High-Resolution Respirometry in Diagnostics of Mitochondrial Diseases Caused by Mitochondrial Complex I Deficiency

Krylova T., Tsygankova P., Itkis Y., Sheremet N., Nevinitsyna T., Mikhaylova S., Zakharova E.

摘要

Mitochondrial complex I deficiency (CID) is one of the most common defects in the OXPHOS system; it represents more than 30% cases of mitochondrial diseases. The group is characterized by clinical and genetic heterogeneity and comprises several nosological forms. The most prevalent phenotypes of CID are Leber hereditary optic neuropathy (LHON) and Leigh syndrome. In this study we have analyzed skin fibroblasts from 11 patients with mutations in mtDNA, which cause LHON or Leigh-like phenotypes (m.11778 G>A (n = 3), m.3460 A>G (n = 2), m.3635 G>A (n = 1), m.3308 T>G (n = 2), m.3472 T>C (n = 1)), and 2 patients with earlier unknown substitutions m.3945 C>A and m.14441 T>C. High-resolution respirometry (HRR) was performed for complex analysis of the mitochondrial respiratory function in intact and permeabilized fibroblasts of patients and healthy controls. Flux control ratios in intact cells R/E, (R-L)/E were raised compared to the control. Rates of R, E, L normalized on the citrate synthase (CS) activity were statistically different (p < 0.05) between patients and controls. In permeabilized fibroblasts we have found statistically significant differences (p < 0.05) in ratios СII/E, Rot/E, R/CII, CI/CII between groups. These data highlight dysfunctions of the OXPHOS system, particularly CI. Increased CS activity and decreased CI/CII ratio suggest a compensatory metabolic response to the respiratory chain dysfunction. Our results show applicability of HRR in revealing biochemical abnormalities of mitochondrial complex I in fibroblasts of patients with LHON and Leigh-like syndrome. We also suggest HRR to be a useful method for inspection of new mutations causing mitochondrial complex I deficiency.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):43-49
pages 43-49 views

Quaternary Structures of Human Cytoplasmic and Nuclear PCNA Are the Same

Belyakova N., Pantina R., Kovalev R., Filatov M., Naryzhny S.

摘要

Properties and mechanisms of PCNA (proliferating cell nuclear antigen) functions have been investigated for a long time and are studied in great detail. As follows from its name, most known PCNA functions (DNA replication, DNA repair, DNA recombination and others) are connected with cell proliferation and localization of this protein in nuclei. In addition, there is good reason to believe that PCNA also performs some functions in the cytoplasm. However, the possible role and mechanisms of PCNA action in the cytoplasm require careful study and clarification. Interestingly, such cells as neutrophils differ in that they are non-dividing on one hand and on the other hand contain a rather large amount of PCNA, which is localized only in the cytoplasm, that is, they are an ideal model for the study of cytoplasmic PCNA. Using cross-linkages with formaldehyde, we showed that this cytoplasmic PCNA is cross-linked in a similar way, that is, organized in the same way as the nuclear PCNA that is present in the proliferating cells. Previously, we showed that PCNA in such cells is organized into a dynamic complex of double trimer on the basis of the back-toback principle. Apparently, such organization of this hub-protein allows it to better coordinate the processes taking place in the cytoplasm as well.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):39-42
pages 39-42 views

The Influence of Cultivation Conditions on the Proteomic Profile of Mycobacterium tuberculosis H37Rv

Bespyatykh J., Manicheva O., Smolyakov A., Dogonadze M., Zhuravlev V., Shitikov E., Ilina E.

摘要

Comparative proteomic profiling of M. tuberculosis H37Rv strains cultured on two different nutrient media, Lowenstein-Jensen and Middlebrook 7H11, was performed using a label-free LC-MS/MS approach. It was shown that results obtained from two media possessed high convergence. The only difference was observed in the representation of fumarate reductase FrdB, its abundance was higher in the mycobacterial cells cultured on the Lowenstein-Jensen medium. The correlation analysis of biological repeats revealed the high convergence of the results obtained using the Middlebrook 7H11 medium. Thus, we can conclude that the use of the Middlebrook 7H11 medium is most appropriate in the scientific laboratory.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):32-38
pages 32-38 views

Comparative Analysis of Expression of Genes Encoding Enzymes of Catecholamine Catabolism and Renalase in Tissues of Normotensive and Hypertensive Rats

Fedchenko V., Medvedev A.

摘要

Comparative analysis of expression of genes encoding enzymes of catecholamine catabolism (monoamine oxidases A and B (MAO A and MAO B) and catechol-O-methyl transferase (COMT)) and renalase has been carried out in tissues of normotensive Wistar-Kyoto (WKY) rats and spontaneously hypertensive rats (SHR). Among investigated tissues the highest level of mRNA of genes encoding key enzymes of catecholamine catabolism (MAO A, MAO B, COMT) was found in the heart of WKY rats. In SHR the mRNA levels of these genes were lower (p < 0.05–0.01), however, no similar changes were observed in the tissues studied in dependence of hypertension. The relative mRNA levels of the studied genes normalized versus actin mRNA significantly varied. In heart and kidney the relative level of COMT mRNA significantly exceeded the relative levels of both MAO A mRNA and MAO B mRNA. In the brain differences in mRNAs of MAOA, MAOB, and COMT were less pronounced. However, in all examined tissue the renalase mRNA level was much (at least 10–20-fold) lower than any other mRNA studied. Taking into consideration known correlations between mRNAs and corresponding protein products reported in the literature for many genes these results suggest that in the case of any catalytic scenarios proposed or even proved for renalase this protein cannot contribute to catecholamine degradation. It is also unlikely that the products of the renalase reaction, β-NAD(P)+ and hydrogen peroxide, can exhibit a hypotensive effect due to low expression of the renalase encoding gene.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):27-31
pages 27-31 views

The Effect of Neurotoxin MPTP Administration to Mice on the Proteomic Profile of Brain Isatin-Binding Proteins

Buneeva O., Kopylov A., Nerobkova L., Kapitsa I., Zgoda V., Medvedev A.

摘要

Isatin (indole-2,3-dione) is an endogenous indole found in the mammalian brain, peripheral organs and body fluids. It acts as a neuroprotector, which decreases manifestation of locomotor impairments in animal models of Parkinson’s disease. A wide range of biological activity of isatin is associated with interaction of this regulator with numerous isatin-binding proteins. The aim of this study was to investigate the profile of brain isatin-binding proteins in mice with MPTP-induced Parkinsonism characterized by maximal manifestation of locomotor impairments (90 min) and seven days after administration of this neurotoxin. A single dose administration of MPTP (30 mg/kg, ip.) was accompanied by locomotor impairments in the open field test 90 min after administration; seven days after MPTP administration locomotor activity of mice significantly improved but did not reach the control level. Five independent experiments on proteomic profiling of isatin-binding proteins resulted in confident identification of 96 ± 12 proteins. Development of MPTPinduced locomotor impairments was accompanied by a significant decrease in the number of isatin-binding proteins (63 ± 6; n = 5; p < 0.01). Seven days after MPTP administration the total number of identified proteins increased and reached the control level (132 ± 34; n = 4). The profiles of isatin-binding proteins were rather specific for each group of mice: in the control group these proteins (which were not found in both groups of MPTP-treated mice) represented more than 70% of total proteins. In the case of MPTP treated mice this parameter was 60% (90 min after MPTP administration) and >82% (seven days after MPTP administration). The major changes were found in the groups of isatin-binding proteins involved into cytoskeleton formation and exocytosis, regulation of gene expression, cell division and differentiation and also proteins involved in signal transduction.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):22-26
pages 22-26 views

The Role of MicroRNA in Regulation of Signaling Pathways in Gliomas

Kit O., Vodolazhsky D., Rostorguev E., Porksheyan D., Panina S.

摘要

Gliomas are invasive brain tumors characterized by high rates of recurrence and mortality. Glioblastoma multiforme (GBM) is the most aggressive form of glioma with nearly 100% rate of recurrence and unfavorable prognosis in patients. MicroRNAs (miR) are a class of wide-spread short noncoding RNAs that inhibit translation via binding to the mRNA of target genes. The aim of this review is to analyze studies and experimental results on changes in the expression profiles of microRNA which are characteristic for gliomas/ glioblastomas and targeted to components of signaling pathways Hedgehog, Notch, Wnt, EGFR, TGFβ, and HIF1α, aberrantly regulated in the gliomas. Special attention has been paid to the links of microRNA to the targets of 2-hydroxyglutarate, the product of mutant isocitrate dehydrogenase (R132H IDH1), mutational changes of which are specific for the pathogenesis of gliomas. Detection of certain types of microRNA in tissues and blood serum can be used for diagnostics and prediction, including responsiveness of individual patients to therapy, and development of new therapeutic strategies.

Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry. 2018;12(1):1-21
pages 1-21 views