A “Low-Molecular” Approach to the Identification of Microorganisms by MALDI Mass Spectrometry


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Abstract

A new approach to the identification of microorganisms is presented. It includes the transformation of their MALDI mass spectra aimed at reducing mass scale by one order of magnitude and the use of standard software for building mass spectral libraries of low-molecular compounds and library searches. A library of 728 transformed (“rescaled”) mass spectra of 182 strains for some Streptococcus species was built. With this library, the rate of true microorganism identification was estimated by cross-comparison between library mass spectra (internal validation of the approach). The true identification rate was 84% for three Streptococcus species, which corresponds to the average trueness of species identification by MALDI as found in the literature. The proposed approach to identification can be considered as a method of choice for solving identification problems under consideration.

About the authors

B. L. Milman

Institute of Experimental Medicine

Author for correspondence.
Email: bmilman@mail.rcom.ru
Russian Federation, St. Petersburg, 197376

Yu. Yu. Ilyasov

Institute of Experimental Medicine

Email: bmilman@mail.rcom.ru
Russian Federation, St. Petersburg, 197376

N. V. Lugovkina

Institute of Experimental Medicine; Institute of Toxicology

Email: bmilman@mail.rcom.ru
Russian Federation, St. Petersburg, 197376; St. Petersburg, 192019

A. A. Golovina

Institute of Experimental Medicine

Email: bmilman@mail.rcom.ru
Russian Federation, St. Petersburg, 197376

A. V. Dmitriev

Institute of Experimental Medicine

Email: bmilman@mail.rcom.ru
Russian Federation, St. Petersburg, 197376


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