Email this article The genome nucleotide sequence of herpes simplex virus 1 strain L2
- Authors: Skoblov M.Y.1,2, Lavrov A.V.1,3, Bragin A.G.4, Zubtsov D.A.2, Andronova V.L.5, Galegov G.A.5, Skoblov Y.S.6
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Affiliations:
- Research Centre for Medical Genetics
- Moscow Institute of Physics and Technology
- Department of Molecular and Cellular Genetics
- Parsek Laboratory
- Ivanovskii Institute of Virology of the Gamalei Federal Research Centre for Epidemiology and Microbiology
- Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry
- Issue: Vol 43, No 2 (2017)
- Pages: 140-142
- Section: Article
- URL: https://journals.rcsi.science/1068-1620/article/view/228363
- DOI: https://doi.org/10.1134/S1068162016060133
- ID: 228363
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Abstract
The genome nucleotide sequence of the reference strain of herpes simplex virus type 1 was obtained using the technique of full size sequencing. For the virus genome structure determination, 402444 reads with an average length of 202 bp were performed, which corresponded to the 542-fold genome coverage. The data were collected to 52 contigs with N50-4518 and the total contig length of 120929 bp. The sequence obtained was deposited into the GenBank database.
About the authors
M. Yu. Skoblov
Research Centre for Medical Genetics; Moscow Institute of Physics and Technology
Email: sur@ibch.ru
Russian Federation, Moscow, 115478; Dolgoprudnyi, Moscow oblast, 141700
A. V. Lavrov
Research Centre for Medical Genetics; Department of Molecular and Cellular Genetics
Email: sur@ibch.ru
Russian Federation, Moscow, 115478; Moscow, 117997
A. G. Bragin
Parsek Laboratory
Email: sur@ibch.ru
Russian Federation, St. Petersburg, 199034
D. A. Zubtsov
Moscow Institute of Physics and Technology
Email: sur@ibch.ru
Russian Federation, Dolgoprudnyi, Moscow oblast, 141700
V. L. Andronova
Ivanovskii Institute of Virology of the Gamalei Federal Research Centre for Epidemiology and Microbiology
Email: sur@ibch.ru
Russian Federation, Moscow, 123098
G. A. Galegov
Ivanovskii Institute of Virology of the Gamalei Federal Research Centre for Epidemiology and Microbiology
Email: sur@ibch.ru
Russian Federation, Moscow, 123098
Yu. S. Skoblov
Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry
Author for correspondence.
Email: sur@ibch.ru
Russian Federation, Moscow, 117997
