Application of the DBSCAN Algorithm to Detect Hydrophobic Clusters in Protein Structures


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Hydrophobic cores and hydrophobic clusters play a key role in globular protein folding, providing a framework for functionally important amino acid residues of proteins and enzymes. A program was developed for clustering amino acid residues in protein structures, which takes into account their hydrophobicity and utilizes the DBSCAN algorithm. The program is described and its scope and applicability are outlined.

作者简介

A. Lashkov

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”
Russian Academy of Sciences

编辑信件的主要联系方式.
Email: alashkov83@gmail.com
俄罗斯联邦, Moscow, 119333

S. Rubinsky

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”
Russian Academy of Sciences

Email: alashkov83@gmail.com
俄罗斯联邦, Moscow, 119333

P. Eistrikh-Heller

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics,”
Russian Academy of Sciences

Email: alashkov83@gmail.com
俄罗斯联邦, Moscow, 119333

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