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Vol 53, No 6 (2019)

Article

Studying the Role of Protein Kinases CK1 in Organization of Cortical Microtubules in Arabidopsis thaliana Root Cells

Karpov P.A., Sheremet Y.A., Blume Y.B., Yemets A.I.

Abstract

The members of the casein kinase 1 (CK1) subfamily are distinguished by interspecific conservatism and an extensive set of phosphorylation substrates. Recently, appeared strong evidence that CK1 are able to phosphorylate tubulin directly. Thus, CK1 contribute to the tubulin code and functional specialization of microtubules. In this work, we present the results of studying the response of plant tubulin cytoskeleton to the treatment with the CK1-specific inhibitor D4476. It was demonstrated that D4476 shows a strong dose-dependent effect on Arabidopsis thaliana root growth and morphology. The experiments on the plants expressing chimeric gfp-map4 gene construct proved the relation of the observed morphological reactions with the spatial organization of microtubules caused by a selective inhibition of protein kinases CK1.

Cytology and Genetics. 2019;53(6):441-450
pages 441-450 views

Application of Beta-Glucuronidase Transient Expression for Selection of Maize Genotypes Competent for Genetic Transformation

Nitovska I.O., Abraimova O.Y., Duplij V.P., Derkach K.V., Satarova T.M., Rudas V.A., Cherchel V.Y., Dziubetskyi B.V., Morgun B.V.

Abstract

Genetic transformation of inbred maize lines and F1 hybrids registered in Ukraine has been carried out. The study employed a biolistic method for genetic transformation of immature maize embryos that formed callus tissue and the pAHC25 vector containing the genes of phosphinothricin-N-acetyltransferase (bar) and β-glucuronidase (uidA). As a result of the transformation of callus tissue of maize genotypes, lines resistant to phosphinothricin and regenerated plants were obtained. The activity of β-glucuronidase in herbicide-resistant calli was detected. The presence of the bar gene in callus DNA was demonstrated by the PCR method. The rate of stable transformation ranged from 2.2 to 30% depending on the genotype. The relationship between the results of transient expression of the β-glucuronidase gene and stable genetic transformation was observed. The proposed protocol for genetic transformation of maize using the study of transient expression of the β-glucuronidase gene makes it possible to significantly simplify the process of selecting genotypes competent for genetic transformation and create transgenic organisms with new traits.

Cytology and Genetics. 2019;53(6):451-458
pages 451-458 views

5S Ribosomal DNA of Distantly Related Quercus Species: Molecular Organization and Taxonomic Application

Tynkevich Y.O., Volkov R.A.

Abstract

The genus Quercus (oak) is a widespread and economically important genus of tree plants. The intrageneric taxonomy of this group remains controversial due to widely distributed interspecific hybridization and convergent similarity of morphological traits. Further progress in this problem requires application of molecular methods. Taking into account that the comparison of 5S rDNA was successfully used in the molecular taxonomy of plants, we cloned and sequenced this genomic region for representatives of three taxo-nomically distant Quercus species: Q. acutissima (sect. Cerris) and Q. glauca (sect. Cyclobalanopsis) from East Asia and Q. texana (sect. Lobatae) from North America. We also identified 5S rDNA in the genome sequences available in the Genbank database for North American species Q. lobata (sect. Quercus) and for the related genus Castanea. It was found that the 5S rDNA repeated units demonstrate a high level of intragenomic sequence similarity in representatives of genus Quercus. The potential external elements of the 5S rDNA promoter differ from those in other families of dicotyledonous plants. The results of the comparative sequence analysis of the 5S rDNA intergenic spacer region support the existing taxonomy of the genus and indicate the isolated position of section Cyclobalanopsis, which can be considered as a separate subgenus.

Cytology and Genetics. 2019;53(6):459-466
pages 459-466 views

The Influence of Recombinant Interferon α2b Synthesized in Plants on the Reparative Enzyme MGMT Expression in Human Somatic Cells in vitro

Nidoieva Z.M., Peterson A.A., Ruban T.P., Dzuba G.V., Kuchuk M.V., Lukash L.L.

Abstract

We investigated the influence of transgene interferon α2β synthesized in plants on human repair enzyme O6-methylguanine-DNA methyltransferase (MGMT) in both cancer and non-cancer originated cells. Using Western-blot analysis we determined MGMT quantity in cancer-originated Hеp-2 cells (epidermoid carcinoma of the larynx) and non-cancer E8 ones (derived in our laboratory from germline cells) were treated with purified transgene interferon α2β in serum-free medium. Interferon α2β caused decrease of the MGMT protein amount in the cancer-originated Hеp-2 cells at all treated concentrations (2, 20, 200, 2000 IU/mL) relative to the control. In human non-cancer originated E8 cells we revealed a decrease in MGMT levels at the both highest concentrations: 200 and 2000 IU/mL, although only at 200 IU/mL the downregulation effect was statistically significant. Thus, the transgenic interferon inhibitory effect was more noticeable in the cancer-originated cells compared to the non-cancer ones.

Cytology and Genetics. 2019;53(6):467-472
pages 467-472 views

Estimating Genetic Diversity of Silver (Hypophthalmichthys molitrix Val.) and Bighead (Hypophthalmichthys nobilis Rich.) Carps Grown in Aquaculture in the Republic of Belarus Based on Polymorphism of Microsatellite Loci

Nosova A.Y., Kipen V.N., Tsar A.I., Lemesh V.A.

Abstract

In this work, the genetic diversity of silver (Hypophthalmichthys molitrix Val.) and bighead (Hypophthalmichthys nobilis Rich.) carps bred on the territory of the Republic of Belarus was estimated according to genotyping of 11 STR loci (Hmo11, Hmo13, Hmo15, Hmo25, Hmo26, Hmo31, Hmo33, Hmo34, Hmo36, Hmo37, Hmo40). The following indices were calculated: average number of alleles per locus, effective number of alleles, levels of expected and observed heterozygosity, Shannon’s information index value, and FIS fixation index. The results obtained indicate a moderate (for bighead carp) and sufficiently high (for silver carp) genetic diversity of the studied samples, up to the possibility to allocate several groups for subsequent work on obtaining linear material and further reproduction. To achieve these goals, special attention should be paid to the selection of pairs of producers taking into account the results of molecular-genetic analysis. The estimation of genetic diversity of these species of herbivorous fishes bred in the Republic of Belarus as compared with the results of other studies indicates a significant genetic resource of domestic producers.

Cytology and Genetics. 2019;53(6):473-480
pages 473-480 views

Expression of Nos2 and Acan Genes in Rat Knee Articular Cartilage in Osteoarthritis

Dranitsina A.S., Dvorshchenko K.O., Korotkyi O.H., Vovk A.A., Falalyeyeva T.M., Grebinyk D.M., Ostapchenko L.I.

Abstract

Degenerative changes in the cartilage tissue of rats with sodium monoiodoacetate-induced osteoarthritis were detected during this histological study and the effect was evaluated of chondroitin sulfate and a multiprobiotic preparation on the healing process, such as the absence, due to the coadministration of these preparations, of postnecrotic changes in the cartilage surface and its replacement by fibrous elements. A molecular analysis of the cartilage tissue sampled from rats with experimental osteoarthritis has equally shown an increase in the Nos2 gene expression and a decrease in the Acan gene expression compared with the control group of animals, which indicates the activation of inflammatory and destructive processes in the tissue. Due to the coadministration of chondroitin sulfate and the multiprobiotic in the same conditions, the expression pattern of the Nos2 and Acan genes returned to the control values, which indicated the clinical prospects for the multiprobiotic as a substance able to enhance the anti-inflammatory and antioxidant action of this chondroprotector in osteoarthritis.

Cytology and Genetics. 2019;53(6):481-488
pages 481-488 views

Activation of the PI3K/Akt/mTOR/p70S6K1 Signaling Cascade in the Mononuclear Cells of Peripheral Blood: Association with Insulin and Insulin-Like Growth Factor Levels in the Blood of Patients with Cancer and Diabetes

Vatseba T.S., Sokolova L.K., Pushkarev V.V., Kovzun O.I., Guda B.B., Pushkarev V.M., Tronko M.D.

Abstract

The aim of the present work was to determine the insulin and insulin-like growth factor (IGF-1) content in blood in association with the activity of the end components of the PI3K/Akt/mTORC1/p70S6K signaling cascade in the peripheral blood mononuclear cells (PBMC) of patients with type 2 diabetes (T2D) and cancer. Insulin and IGF-1 levels in blood and Akt (Ser473) and p70S6K (Thr389) phosphorylation in PBMC were studied by enzyme immunoassay in the following groups: 1—control group—age-representative group of healthy individuals; 2—T2D patients; 3—cancer patients; 4—patients with both cancer and T2D. It has been demonstrated that the insulin level is significantly increased in the blood of T2D patients and the patients with T2D and cancer (group 4). The IGF-1 level is substantially increased in cancer patients. Akt and p70S6K phosphorylation is enhanced in cancer patients, which indicates the activation of these protein kinases. The mechanisms linking Akt and p70S6K activation in PBMC and insulin and IGF-1 levels in the blood of patients with cancer and diabetes are discussed.

Cytology and Genetics. 2019;53(6):489-493
pages 489-493 views

Phenolic Compounds of Codiaeum variegatum Spirale Lessened Cytotoxic and Genotoxic Effects of Mitomycin C in Mice Somatic and Germ Cells

Mona A.M. Abo-Zeid ., Farghaly A.A., Hassan E.M., Abdel-Samie N.S.

Abstract

This study evaluates the chemopreventive properties of phenolic compounds extracted from Codiaeum variegatum (PCCV) against cytotoxic and genotoxic effects of mitomycin C (MMC). Male Swiss albino mice were treated with PCCV and/or MMC, and samples were collected 24 h after the last treatments. We recorded chromosome aberrations in bone-marrow cells and spermatocytes, cell viability and DNA damage (using comet assay) in bone-marrow cells. We observed that the highest concentration of PCCV did not induce cytotoxic or genotoxic effects on mice somatic and germ cells. However, MMC reduced cell proliferation remarkably (p < 0.05), and increased chromosome aberrations and DNA damage significantly. Additionally, PCCV prohibited cytotoxicity and genotoxicity of MMC when administered to animals 2h prior to MMC. Evidently, PCCV induced a significant inhibition (p < 0.05) in the percentages of chromosome aberrations in bone-marrow cells excluding gaps (19.82, 25.23, and 42.34%) and spermatocytes (22.73, 31.82, and 48.48%) at concentrations 125, 250 and 500 mg/kg b.wt respectively. Likewise, PCCV declined tail DNA (%), tail length (μm) and tail moment, and the inhibitory index of tail DNA (%) reached to 89.44% at 500 mg/kg b.wt. In conclusion, phenolic compounds of Codiaeum variegatum reduced the cytotoxic and genotoxic effects that were induced by the mutagenic agent MMC.

Cytology and Genetics. 2019;53(6):494-501
pages 494-501 views

Association of the ACE (rs1800764) Polymorphism with Risk of Diabetic Kidney Disease in Saudi Arabian Population: A Pilot Study using the PCR-RFLP Method

Mohthash Musambil ., Al-Rubeaan K., Sufayran A., Al-Qasim S., Al-Naqeb D.

Abstract

Diabetic kidney disease (DKD) also known as diabetic nephropathy is the leading cause of end-stage renal disease, with multiple genetic and environmental factors involving in its etiology. Angiotensin-converting enzyme (ACE) gene is considered to have an important role in the development and progression of DKD. In this case-control study, we investigated the role of ACE T3892C (rs1800764) polymorphism in the development of DKD in Saudi Arabian population. We recruited 150 type 2 diabetic cases with DKD and 150 type 2 diabetic controls without DKD. The differences in age, sex, systolic blood pressure (SBP), diastolic blood pressure (DBP), duration of diabetes, fasting blood glucose, urinary albumin, albumin/creatinine ratio, serum urea and serum-creatinine between the two groups were analyzed. The genotyping of ACE T3892C polymorphism was performed using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. Genotype and allele frequencies were calculated by direct counting. Deviations from Hardy–Weinberg equilibrium (HWE) were tested using the Chi-square (χ2) test in both of studied groups. Odds ratio (OR) with 95% CI were used to evaluate the relationship of ACE T3892C polymorphism with DKD susceptibility. Statistical analysis was performed using SPSS (version 21.0) software and Medcalc software (version 16.4.3). The frequency distribution of ACE T3892C polymorphism was found to be different between case and control groups significantly indicating ACE gene could play an important role in the pathogenesis of DKD in Saudi Arabian population.

Cytology and Genetics. 2019;53(6):502-509
pages 502-509 views

Characterization and Phylogenetic Analysis of the Complete Chloroplast Genome of Orinus kokonoricus (Poaceae), an Endemic Species from the Qinghai-Tibet Plateau

Yuping Liu ., Lv T., Liu T., Su X.

Abstract

Orinus kokonoricus is an alpine perennial grass (Poaceae) endemic to the Qinghai-Tibet Plateau (QTP) in China, which has extremely important ecological and genetic values. To explore characterization and phylogenetic analysis of the complete chloroplast (cp) genome of O. kokonoricus, we first sequenced and assembled its cp genome with Illumina HiSeq4000 platform in the present study. The results showed that the complete cp genome of O. kokonoricus is 134,466 bp in length with a high AT content of 61.6% and displays a standard quadripartite structure including one large single copy region (LSC, 79,932 bp), one small single copy region (SSC, 12,490 bp) and two inverted repeat regions (IRA and IRB, 21,022 bp each). It totally encodes 137 genes containing 81 protein-coding genes, 45 tRNAs genes and eight rRNAs genes. Moreover, most of these genes occur in the single copy regions. Among all annotated genes of the cp genome of O. kokonoricus, none of them harbors introns. In addition, phylogenetic analysis based on 40 complete cp genome sequences of Poaceae revealed that O. kokonoricus is sister clade to the clade of Eragrostis species in Chloridoideae.

Cytology and Genetics. 2019;53(6):510-514
pages 510-514 views

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