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卷 55, 编号 5 (2019)

Article

Antioxidative System of Plants: Cellular Compartmentalization, Protective and Signaling Functions, Mechanisms of Regulation (Review)

Kolupaev Y., Karpets Y., Kabashnikova L.

摘要

The current data on the generation and neutralization of reactive oxygen species in various compartments of plant cells are summarized. The role of antioxidants (AOs) in the protection of macromolecules and cellular structures from oxidative damage is considered. Special attention is paid to the participation of AOs in redox signaling and the regulation of cellular functions. The cross-link between the functioning of the AO system (AOS) and the nonspecific plant resistance to stressors is analyzed. The regulation of AOS in plants under the action of exogenous AOs, signal mediators, phytohormones, and other physiologically active substances, as well as by transgenesis, is considered.

Applied Biochemistry and Microbiology. 2019;55(5):441-459
pages 441-459 views

Structural and Functional Characteristics of Hydrolytic Enzymes of Phytophagon Insects and Plant Protein Inhibitors (Review)

Tsvetkov V., Yarullina L.

摘要

The data on proteolytic, cellulolytic, proteolytic, and amylolytic enzymes of insect pests and their inhibitors from plants are considered and generalized. The structure, physical, chemical and functional properties of enzymes and inhibitors are described. The analyzed data showed that the search for possible ways to improve the inhibitor activity of insect hydrolases is relevant for the creation of pesticide alternatives.

Applied Biochemistry and Microbiology. 2019;55(5):460-469
pages 460-469 views

Campylobacter spp. and Typing Tools (Review)

Guzmán-Martín J., González-Bustos P., Gutiérrez-Fernández J.

摘要

Campylobacter spp. are the principal bacteria causing human gastroenteritis globally. Recently, several species of Campylobacter other than C. jejuni and C. coli have been identified. These emerging species have been associated with undiagnosed intestinal infectious diseases, although their clinical importance has not been determined yet. In order to establish the implication of the emerging bacterial species in human gastroenteritis, several epidemiological studies have been performed, where molecular typing methods have played a central role. This review provides an overview of the most used molecular typing tools used to characterized Campylobacter species.

Applied Biochemistry and Microbiology. 2019;55(5):470-473
pages 470-473 views

Synthesis and Characterization of Polyaspartic Acid-Histidine Conjugate as an Analog of Antioxidant Enzymes

Kamalov M., Sadrieva G., Pavlyuk A., Salakhieva D., Petrova N., Abdullin T.

摘要

Polyamino acids are versatile macromolecules with potential to be used as bioactive compounds and drug carriers. Polyaspartic acid (pAsp) and amide conjugate of pAsp with L-histidine (pAsp–His) were synthesized and their catalytic antioxidant properties were studied. pAsp–His did not exhibit the ability to decompose hydrogen peroxide. According to the redox reaction of generation of superoxide radical (SOR) by NADH/phenazine methosulfate, pAsp–His at a concentration of ≥0.1 mg/mL showed superoxide dismutase (SOD)-like activity similar to that of SOD-2 (100 U/mL). In addition, we showed that L-histidine in composition with manganese (II) and copper (II) ions catalyzed SOR dismutation in proportion to the amino acid concentration. SOD-like activity of pAsp–His was observed without addition of metal cofactors. The conjugate caused some cytotoxic effect towards cancer cells (PC-3 line, IC50 ≈ 0.8 mg/mL, 72 h) and modulated viability human skin fibroblasts. The results are of particular interest for the development of bioactive peptides, which mimic action of natural enzymes.

Applied Biochemistry and Microbiology. 2019;55(5):474-481
pages 474-481 views

Cloning, Heterologous Expression and Characterization of an Intracellular Serine Protease from Bacillus sp. LCB10

Hou Y., Lu F., Tian J., Tian Y.

摘要

An intracellular serine protease designated ISPr from newly isolated salt-tolerant Bacillus sp. LCB10 was expressed in Escherichia coli. The isp gene was cloned into pET30a vector and expressed in E. coli BL21 (DE3). After purification, the molecular mass of ISPr was estimated to be 35 kDa by SDS-PAGE and the specific activity was 384 U/mg. The protease showed optimal activity at 40°C and pH 10.0. ISPr was active and stable in wide range of alkaline pH. ISPr activity increased 1.8-fold in the presence of Mn2+ and was completely inhibited by PMSF. The enzyme exhibited high NaCl tolerance. The protease had a stable activity in the presence of 1–5% NaCl and retained 86% activity in the presence 7% NaCl, thus, this enzyme would have great potential in industry.

Applied Biochemistry and Microbiology. 2019;55(5):482-488
pages 482-488 views

Increased Productivity and Antifreeze Activity of Ice-binding Protein from Flavobacterium frigoris PS1 Produced using Escherichia coli as Bioreactor

Kim E., Kim J., Hwang J., Kim I., Lee S., Kim S., Lee J., Han S.

摘要

Ice-binding proteins (IBPs) inhibit the growth and recrystallization of intracellular ice, enabling polar organisms to survive at subzero temperatures. IBPs are promising materials in biomedical applications such as cryopreservation and the hypothermic storage of cells, tissues, and organs. In this study, recombinant IBP from the antarctic bacterium Flavobacterium frigoris PS1 (FfIBP) was produced by Escherichia coli used as bioreactor, to examine the feasibility of scale-up. Oxygen transfer was the most important factor influencing cell growth and FfIBP production during pilot-scale fermentation. The final yield of recombinant FfIBP produced by E. coli harboring the pET28a-FfIBP vector system was 1.6 g/L, 3.8-fold higher than that from the previously published report using pCold I-FfIBP vector system, and its thermal hysteresis activity was 2.5°C at 9.7 µM. This study demonstrates the successful pilot-scale production of FfIBP.

Applied Biochemistry and Microbiology. 2019;55(5):489-494
pages 489-494 views

Membranolytic Effects of KT2 on Gram-Negative Escherichia coli Evaluated by Atomic Force Microscopy

Theansungnoen T., Jangpromma N., Anwised P., Daduang S., Fukumori Y., Taoka A., Klaynongsruang S.

摘要

KT2 is a cationic antimicrobial peptide belonging to Crocodylus siamensis leucrocin I analogs. The mode of action of this compound taken at lethal concentration includes translocation into bacterial cells where binding to DNA is presumed to occur. However, the effects of KT2 on bacterial membrane have not been completely elucidated to date. In this study, a LIVE/DEAD staining technique was used to estimate the appropriate time of peptide-bacteria interaction. The results indicated more than 90% of Escherichia coli population was killed at density of ∼5 × 108 CFU/mL within 30 min after treatment with KT2 at MIC and 10 × MIC. The effects of KT2 on bacterial cells were investigated by the atomic force microscopy (AFM). At near MICs, the peptide induced heavy indentation of the bacterial surface as well as cellular collapse. Conversely, at concentrations of several times the MIC the potential to kill bacteria was greatly increased as judged by the induction of multiple membrane buds on the cell surface. Therefore, the collected results indicate that KT2 can cause different effects on bacterial surface which are positively correlated in magnitude and severity with peptide concentration via membranolytic effects.

Applied Biochemistry and Microbiology. 2019;55(5):495-505
pages 495-505 views

Effect of Salt Stress on Acetoin Metabolism of an Aroma-producing Strain Bacillus subtilis

Qiao M., Wu H., Liu Y., Lu Y., Deng J.

摘要

An aroma-producing strain B15 was isolated from a spontaneous fermentation culture of traditional Chinese sweet bean sauce (Tian Wei Food Co., Ltd., China), and identified as Bacillus subtilis, exhibiting an ability to synthesize acetoin. In order to better understand the influence of salt stress on acetoin metabolism, a metabolic network of B. subtilis for synthesis of acetoin was established, and the changes in levels of acetoin, glucose, lactic acid, amylase activity, cell dry weight and amino acids were measured during fermentation under 0.5, 5 and 10% NaCl. After the metabolic flux analysis of 3 important metabolite nodes (glucose-6-phosphate, fructose-6-phosphate and pyruvic acid) and the role of amino acids and NADPH in metabolic network, it was found that salt stress greatly affected the metabolic content of pyruvate, and the total carbon flux distribution of amino acids and NADPH decreased in different pathways along with the increase of salt concentration. The results provided a further in-depth investigation of B. subtilis strategies in the struggle for acetoin biosynthesis under salt stress.

Applied Biochemistry and Microbiology. 2019;55(5):506-513
pages 506-513 views

Effect of the Method of Nanocomplex Synthesis on the Proteolytic Activity of Chymotrypsin Immobilized on Silver Nanoparticles

Plyushchenko A., Borovikova L., Pisarev O.

摘要

Two methods for the synthesis of hybrid organic-inorganic nanocomplexes comprising chymotrypsin and silver nanoparticles have been developed based on the chemical reduction of silver nitrate by sodium borohydride. In the first method, the enzyme is added to the reaction mixture simultaneously with other reagents. In the second method, it is added to the reaction mixture at certain intervals after the start of the reduction reaction. Chymotrypsin immobilized on nanocomplexes stabilizes silver nanoparticles. As compared to the native enzyme, the immobilized enzyme prepared by the both methods exhibits an increased proteolytic activity in acidic and strongly alkaline media. At the same time, chymotrypsin immobilized on silver nanoparticles by the second method exhibits the highest level of proteolytic activity.

Applied Biochemistry and Microbiology. 2019;55(5):514-517
pages 514-517 views

Detection of RNA Hydrolysis with Binase by Acridine Orange Fluorescence

Doynikova A., Vekshin N.

摘要

Fluorescence spectroscopy was used to study the specific hydrolysis of ribosomal RNA by binase in aqueous buffer solutions. Acridine orange was used for RNA staining. When the dye was bound to RNA, its fluorescence intensity increased by two times due to the formation of a stable complex. During RNA hydrolysis by binase for 1–20 min, this complex was cleaved, which was accompanied by a nearly twofold decrease in fluorescence. The degree of polarization of the dye fluorescence during hydrolysis was reduced by a factor of 5.5. The hydrolysis reaction was slower at a pH of 5.0–6.0 than at a pH of 7.0–8.0, but it proceeded almost until the end. Hydrolysis was slowed with an increase in the ionic strength of the buffer and was suppressed by magnesium ions. The studied reaction can be further used as a convenient, selective, fluorometric method for the detection of single-stranded ribosomal RNA and the study of their properties.

Applied Biochemistry and Microbiology. 2019;55(5):518-523
pages 518-523 views

Characteristics of the Chromatographic Cleaning and Protectiveness of the LcrV Isoform of Yersinia pestis

Kopylov P., Svetoch T., Ivanov S., Kombarova T., Perovskaya O., Titareva G., Anisimov A.

摘要

Electrophoretic, homogeneous, highly purified preparations of various isoforms of the immunodominant antigen V (LcrV protein) of Yersinia pestis have been obtained via chromatographic purification. A significant similarity in the chromatographic profiles of the LcrV antigen isoforms of different strains with tryptophan (W113) and glutamic acid (E113) residues at position 113, which differed from the isoform profile containing glycine residue LcrV (G113), has been recorded. The latter is characterized by the highest antigenic and protective activity as compared with other protein isoforms. This isoform almost completely protected the immunized group of animals and had the greatest ability to induce the production of antibodies, the titers of which reached 1 : 250 000.

Applied Biochemistry and Microbiology. 2019;55(5):524-533
pages 524-533 views

Effect of Starch Composition on the Biosynthesis of Immunosuppressant Tacrolimus (FK-506) by Streptomyces tsukubaensis VKM Ac-2618D Strain

Poshekhontseva V., Fokina V., Sukhodolskaya G., Shutov A., Donova M.

摘要

The dependence of biosynthesis of macrolide immunosuppressive agent tacrolimus (FK-506) in starch-containing media by the Streptomyces tsukubaensis VKM Ac-2618D strain on the molecular weight and composition of potato starch polysaccharides was studied. It was shown that the use of high-molecular branched starches as a carbon source provided a higher tacrolimus yield as compared to linear low-molecular polysaccharides at the similar culture growth indicators. The approaches providing the highest rate of tacrolimus biosynthesis by using high- and low-molecular starches and dextrins have been proposed. The biosynthesis process carrying out under the periodic batch cultivation with fractional starch feeding increased the tacrolimus yield significantly (up to 2 times), maintained biomass at a high level and reduced destructive processes rates. The maximum tacrolimus titer was observed when high-molecular potato starches were added to the culture in the retardation growth phase, while the best positive effect for low-molecular starches and dextrins additives was noted at stationary growth phase. The results could be useful in creating biotechnology for the production of pharmaceutical tacrolimus.

Applied Biochemistry and Microbiology. 2019;55(5):534-543
pages 534-543 views

Isolation and Cleaning of Lactate Dehydrogenase from Pea (Pisum sativum L.) Roots by Hypoxia and the Study of Its Regulatory Properties

Eprintsev A., Komarova N., Falaleeva M., Beloglazova A.

摘要

The placement of pea plants (Pisum sativum L.) under flooding conditions led to an increase in lactate dehydrogenase (EC 1.1.1.27) activity in the roots. The enzyme was purified to an electrophoretic homogeneous state by a multistage purification method including ammonium sulfate fractionation, ion exchange chromatography on DEAE-Sephacel, and gel chromatography on Sephadex G-200. The degree of purification was 43.4, the yield was 2.5%, and the specific activity was 80.5 U/mg protein. Its physicochemical properties were studied: the molecular weight of the native lactate dehydrogenase molecule was 138 kDa. The molecular weight of the subunits was determined by PAGE by electrophoresis in the presence of DDS-Na. Its value was 34 kDa, which indicates that the enzyme is a homotetramer. The kinetic and regulatory properties of the enzyme and the values ​​of the Michaelis constants were established. he effect of the concentration of hydrogen ions and temperature on direct and reverse reactions catalyzed by it was obtained. It was determined that lactate dehydrogenase inhibited ATP.

Applied Biochemistry and Microbiology. 2019;55(5):544-548
pages 544-548 views

Activity of Neutral Phytase from Obesumbacterium proteus in Recombinant Strains of Yarrowia lipolytica under Cultivation on Low-Grade Vegetable Substrate

Serdyuk E., Isakova E., Gessler N., Trubnikova E., Antipov A., Deryabina Y.

摘要

The characteristics of recombinant phytase from Obesumbacterium proteus have been studied after its integration into Yarrowia lipolytica with a Po1f (pUV3-Op) plasmid. Phytase activity was observed in Y. lipolytica Po1f transformants in a wide pH range (3.5–7.5) and remained at 80% of the initial value after 3-min heating at 95°C, which made it possible to add the enzyme to a fodder produced with heat treatment. In the case of transformant cultivation on low-grade vegetable substrates, they also possessed confirmed phytase activity, as well as an increase in the content of intracellular phosphates as compared to cells of the wild-type Y. lipolytica strain.

Applied Biochemistry and Microbiology. 2019;55(5):549-555
pages 549-555 views

Pathogenicity and Lipid Composition of Mycelium of the Fungus Stagonospora cirsii VIZR 1.41 Produced on Liquid Media with Different Nitrogen Sources

Frolova G., Sokornova S., Berestetskiy A.

摘要

The effect of the nitrogen source (sodium nitrate and soybean meal) on the growth, pathogenicity, and lipid composition of mycelium of Stagonospora cirsii Davis VIZR 1.41, a potential mycoherbicide against Canada thistle (Cirsium arvens (L.) Scop.), was studied. The fungus grew significantly (two times) faster on sucrose-soybean meal medium (SSM) than on modified Czapek medium (CM). The fungal mycelium during the exponential growth phase demonstrated the maximal pathogenicity level on the third day on SSM and on the sixth day on CM. Canada thistle leaf tissues were more susceptible (25% higher development of necrotic lesion) to mycelium obtained on SSM than to mycelium obtained on CM. The nitrogen source strongly affected the lipid composition of S. cirsii mycelium. In S. cirsii mycelium obtained on SSM, the total lipid content was 1.7 times lower; the ratio of nonpolar lipids to polar lipids was three times lower than that for fungal mycelium grown on CM. Considerable differences were found in the composition of nonpolar (sterols and fatty acid) and polar (sphingolipids) lipids with respect to the nitrogen source in the culture medium. The higher contents of sterols, free fatty acids, and some glycoceramides in the mycelium of S. cirsii obtained on SSM may be related to its higher pathogenicity level and can serve as a marker of mycoherbicide quality.

Applied Biochemistry and Microbiology. 2019;55(5):556-562
pages 556-562 views

Development of an Immunoenzyme Assay to Control the Total Content of Antibiotics of the Fluoroquinolone Group in Milk

Shanin I., Zvereva E., Eremin S., Sviridov O., Zherdev A., Dzantiev B.

摘要

A method for preparing antibodies that specifically recognize antibiotics of the fluoroquinolone group with the same radical in the first position of the quinolone nucleus is proposed. The specificity of rabbit antisera prepared at different cycles of immunization by changing the structure of the hapten in the composition of immunogens was characterized. The selected antibodies provided a group-specific analysis of 16 representatives of fluoroquinolones, including a combination of the following compounds that are controlled in animal products: ciprofloxacin, norfloxacin, pefloxacin, ofloxacin, and enrofloxacin. Using these antibodies, an indirect competitive enzyme-linked immunosorbent assay was developed that was characterized by a detection limit of ciprofloxacin of 0.2 ng/mL and a duration of 2 h. The assay was approbated for the detection of fluoroquinolones in milk.

Applied Biochemistry and Microbiology. 2019;55(5):563-569
pages 563-569 views