Virtual screening of selective inhibitors of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis


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Bacterial phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis (PPAT Mt) is a convenient target protein for the directed search for selective inhibitors as potent antituberculosis drugs. Four compounds suitable for the detailed investigation of their interactions with PPAT Mt were found by virtual screening. The active-site region of the enzyme was chosen as the ligand-binding site. The positions of the ligands found by the docking were refined by molecular dynamics simulation. The nearest environment of the ligands, the positions of which in the active site of the enzyme were found in a computational experiment, was analyzed. The compounds under consideration were shown to directly interact with functionally important active-site amino-acid residues and block access of substrates to the active site. Therefore, these compounds can be used for the design of selective inhibitors of PPAT Mt as potent antituberculosis drugs.

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D. Podshivalov

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics”; National Research Centre “Kurchatov Institute”; Moscow State University

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Email: david.podshivalov@mail.ru
俄罗斯联邦, Moscow, 119333; Moscow, 123098; Moscow, 119991

V. Timofeev

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics”; National Research Centre “Kurchatov Institute”

Email: david.podshivalov@mail.ru
俄罗斯联邦, Moscow, 119333; Moscow, 123098

D. Sidorov-Biryukov

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics”

Email: david.podshivalov@mail.ru
俄罗斯联邦, Moscow, 119333

I. Kuranova

Shubnikov Institute of Crystallography of Federal Scientific Research Centre “Crystallography and Photonics”; National Research Centre “Kurchatov Institute”

Email: david.podshivalov@mail.ru
俄罗斯联邦, Moscow, 119333; Moscow, 123098

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