Comparative analysis of the taxonomic classification criteria for a number of groups of pathogenic DNA and RNA viruses based on genomic data

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Abstract

The basis for criteria of the taxonomic classification of DNA and RNA viruses based on data of the genomic sequencing are viewed in this review. The genomic sequences of viruses, which have genome represented by double-stranded DNA (orthopoxviruses as example), positive-sense single-stranded RNA (alphaviruses and flaviviruses as example), non-segmented negative-sense single-stranded RNA (filoviruses as example), segmented negative-sense single-stranded RNA (arenaviruses and phleboviruses as example) are analyzed. The levels of genetic variability that determine the assignment of compared viruses to taxa of various orders are established for each group of viruses.

About the authors

Tatiana E. Sizikova

48th Central Scientific Research Institute of the Ministry of Defense of the Russian Federation

Email: 48cnii@mil.ru
ORCID iD: 0000-0002-1817-0126

PhD in Biology

Russian Federation, Sergiev Posad

Vitaliy N. Lebedev

48th Central Scientific Research Institute of the Ministry of Defense of the Russian Federation

Email: 48cnii@mil.ru
ORCID iD: 0000-0002-6552-4599

D. Sc. in Biology, Professor, Leading Researcher

Russian Federation, Sergiev Posad

Sergey V. Borisevich

48th Central Scientific Research Institute of the Ministry of Defense of the Russian Federation

Author for correspondence.
Email: 48cnii@mil.ru
ORCID iD: 0000-0002-6742-3919

D. Sc. in Biology, Professor, Academician of the Russian Academy of Sciences, Head of the Institute

Russian Federation, Sergiev Posad

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2. Figure. The position of the Alaska virus, the Akhmat virus and cat poxvirus on the phylogenetic tree of the Old World orthopoxviruses

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