Study of RNA polymerase transcription through nucleosome using the cryo-electron microscopy approach


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Abstract

A promising and reliable method for the analysis of macromolecule structures is capturing images using cryo-electron transmission microscopy and consequently performing three-dimensional reconstructions. In this study, using cryo-electron microscopy, we analyzed the structure of the complex, formed by RNA polymerase stalled at position +42 during its transcription through the nucleosome. We obtained both projection images and a three-dimensional structure of the EC-42 complex at 2.5 nm resolution. This allowed us to confirm the conformational integrity of the nucleosome during the passage of the RNA polymerase.

About the authors

O. I. Volokh

Department of Bioengineering, School of Biology

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

F. K. Hsieh

Robert Wood Johnson Medical School

Email: sokolova@mail.bio.msu.ru
United States, Paterson St. 125, New Brunswick, NJ, 08901

M. G. Karlova

Department of Bioengineering, School of Biology

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

E. S. Trifonova

Department of Bioengineering, School of Biology

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

V. M. Studitsky

Cancer Epigenetics Team

Email: sokolova@mail.bio.msu.ru
United States, Cottman Avenue 333, Philadelphia, PA, 19111

O. S. Sokolova

Department of Bioengineering, School of Biology

Author for correspondence.
Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

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