Secondary Metabolome and Transcriptome of Streptomyces albus J1074 in Liquid Medium SG2
- Авторлар: Koshla O.T.1, Rokytskyy I.V.1, Ostash I.S.1, Busche T.2, Kalinowski J.2, Mösker E.3, Süssmuth R.D.3, Fedorenko V.O.1, Ostash B.O.1
-
Мекемелер:
- Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
- Technology Platform Genomics, Bielefeld University
- Technische Universität Berlin, Institut für Chemie
- Шығарылым: Том 53, № 1 (2019)
- Беттер: 1-7
- Бөлім: Article
- URL: https://journals.rcsi.science/0095-4527/article/view/174011
- DOI: https://doi.org/10.3103/S0095452719010080
- ID: 174011
Дәйексөз келтіру
Аннотация
Streptomyces albus J1074 is one of the most popular chassis for heterologous expression of actinobacterial biosynthetic gene clusters (BGCs). Considerable efforts are invested into understanding all the physiological and genetic aspects of secondary metabolism of J1074 in order to maximize the expression of heterologous BGCs. It has to be noted that the J1074 genome itself is home to numerous (>20) BGCs, whose expression varies widely. Therefore, the identification of the factors limiting the expression of J1074 BGCs might help improve this strain for heterologous expression purposes. As first steps towards this goal, herein we describe the secondary metabolome of J1074 in liquid medium SG2, previously shown by us to support the production of antibacterial and antifungal compounds. We compare the results of metabolomic studies with the transcriptome of J1074 in SG2 after 60 h of growth. Results of our studies are discussed in the context of current knowledge on the J1074 transcriptome and metabolome data.
Негізгі сөздер
Авторлар туралы
O. Koshla
Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
Email: bohdan.ostash@lnu.edu.ua
Украина, Lviv, 79005
I. Rokytskyy
Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
Email: bohdan.ostash@lnu.edu.ua
Украина, Lviv, 79005
I. Ostash
Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
Email: bohdan.ostash@lnu.edu.ua
Украина, Lviv, 79005
T. Busche
Technology Platform Genomics, Bielefeld University
Email: bohdan.ostash@lnu.edu.ua
Германия, Bielefeld, 33615
J. Kalinowski
Technology Platform Genomics, Bielefeld University
Email: bohdan.ostash@lnu.edu.ua
Германия, Bielefeld, 33615
E. Mösker
Technische Universität Berlin, Institut für Chemie
Email: bohdan.ostash@lnu.edu.ua
Германия, Berlin, 10623
R. Süssmuth
Technische Universität Berlin, Institut für Chemie
Email: bohdan.ostash@lnu.edu.ua
Германия, Berlin, 10623
V. Fedorenko
Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
Email: bohdan.ostash@lnu.edu.ua
Украина, Lviv, 79005
B. Ostash
Ivan Franko National University of Lviv, Department of Genetics and Biotechnology
Хат алмасуға жауапты Автор.
Email: bohdan.ostash@lnu.edu.ua
Украина, Lviv, 79005
Қосымша файлдар
