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Vol 50, No 4 (2016)

Article

Influence of protein kinase KIN10 gene expression on root phenotype of Arabidopsis thaliana root system under condition of energy stress

Krasnoperova E.E., Isayenkov S.V., Yemets A.I., Blume Y.B.

Abstract

The phenotypic changes in the root system of Arabidopsis thaliana seedlings in transgenic lines with overexpression and suppressed gene expression of serine-threonine protein kinase KIN10, under conditions of energy shortage and under normal conditions, were shown. The normal growth and development of KIN10 overexpressing plants under energy deficiency conditions were detected. The significant inhibition of the development of these plant lines was observed under normal conditions. The levels of KIN10 gene expression under normal conditions in different organs of Arabidopsis thaliana, particularly in the roots, stems, leaves and flowers were analyzed. The highest-level expression of the gene was found in the leaves.

Cytology and Genetics. 2016;50(4):215-220
pages 215-220 views

Sr33 and Sr35 gene homolog identification in genomes of cereals related to Aegilops tauschii and Triticum monococcum

Ivaschuk B.V., Pirko Y.V., Galkin A.P., Blume Y.B.

Abstract

Using bioinformatics analysis, the homologs of genes Sr33 and Sr35 were identified in the genomes of Triticum aestivum, Hordeum vulgare, and Triticum urartu. It is known that these genes confer resistance to highly virulent wheat stem rust races (Ug99). To identify amino acid sites important for this resistance, the found homologs were compared with the Sr33 and Sr35 protein sequences. It was found that sequences S5DMA6 and E9P785 are the closest homologs of protein RGAle, a Sr33 gene product, and sequences M7YFA9 (CNL-C) and F2E9R2 are homologs of protein CNL9, a Sr35 gene product. It is assumed that the homologs of genes Sr33 and Sr35, which were obtained from the wild relatives of wheat and barley, can confer resistance to various forms of stem rust and can be used in the future breeding programs aimed at improvement of national wheat varieties.

Cytology and Genetics. 2016;50(4):221-230
pages 221-230 views

Immunoregulatory effects of vitamin D3 in experimentally induced type 1 diabetes

Labudzynskyi D.O., Manoylov K.U., Shymanskyy I.O., Veliky M.M.

Abstract

The mechanism underlying the impairment of the function of the cellular component of the immune response and its regulation by vitamin D3 in diabetes mellitus remains incompletely characterized. The present study addresses the specific features of the functioning of the T-cell link of immune response and the humoral response to injecyion of an artificial antigen in a diabetes model and after prolonged administration of vitamin D3. Chronic hyperglycemia occurring in diabetes induced a 2.3-fold decrease of the content of the marker substance 25OHD3, the major precursor of hormonally active forms of vitamin D3, in the serum. The development of vitamin D3 deficiency is accompanied by an impairment of the proliferative activity of T cells and a change in relative numbers of regulatory (CD4+) and cytotoxic (CD8+) lymphocytes. An increase of the content of the phosphorylated p65 subunit of the nuclear factor κB and more intensive translocation of this protein to the nucleus were detected in total lysates of T lymphocytes from the spleen. Moreover, enhancement of the humoral IgG response to intraperitoneal administration of a recombinant B subunit of diphtheria toxin was demonstrated. Impairment of the cellular component of the immune response was accompanied by increased apoptotic death of splenocytes, as is evident from the increased binding of the Annexin V-GFP tag to phosphatidyl serine residues exposed on the external side of the plasmalemma during apoptosis. Prolonged administration of vitamin D3 (during 2 months; dose 20 IU) promoted the normalization of proliferative activity and the relative size of T-cell subpopulations, led to a decrease of the content of the phosphorylated p65 subunit of NF-κB, and improved the balance of the secretion of IgG targeting the artificial antigen in diabetic animals. These changes were accompanied by a decrease in the number of apoptotic events in the entire splenocyte population. The results of the present study demonstrate the important role of vitamin D3 in the regulation of the functions of the immune system in type 1 diabetes.

Cytology and Genetics. 2016;50(4):231-240
pages 231-240 views

Suppressive effect of agmatine on genetically programmed death of leukocytes in a diabetes model

Ferents I.V., Brodyak I.V., Lyuta M.Y., Burda V.A., Sybirna N.O.

Abstract

Effects of agmatine on different stages of apoptotic changes in leukocytes in experimentally induced diabetes mellitus (EDM) have been investigated. The number of leukocytes that showed signs of apoptosis, both early and late, was increased in diabetic animals. The content of fragmented DNA in the leukocytes of the sick animals was elevated, the apoptotic index increased, and the balance between the content of protein regulators of apoptosis (p53 and Bcl-2) was disrupted. Agmatine had a direct corrective effect on the apoptosis of leukocytes, since it normalized the levels of p53 and Bcl-2 proteins, reduced the apoptotic index, suppressed the degradation of nuclear DNA, and reduced the number of cells with early and late signs of apoptosis.

Cytology and Genetics. 2016;50(4):241-250
pages 241-250 views

Polyphasic taxonomic analysis of Bacillus sp. strain C6—the antagonist of phytopathogenic microorganisms

Grabova G.Y., Dragovoz I.V., Zelena L.B., Ostapchuk A.N., Avdeeva L.V.

Abstract

Polyphasic taxonomic analysis was carried out for Bacillus sp. strain C6, as the antagonist of phytopathogenic bacteria and micromycetes. The combination of cultural, morphological, physiological, and biochemical properties of the strain has enabled researchers to refer it to the Bacillus subtilis group. It has been shown that the fatty acids of the strain’s cell walls were predominantly represented by branched iso- and anteiso-C15:0 and C17:0 fatty acids (over 85%), which was typical for the Bacillus amyloliquefaciens species. The molecular genetic analysis carried out on the nucleotide sequence of the 16S rRNA gene, and the profiling of polymorphic nucleotides have enabled researchers to refer the strain in question to Bacillus amyloliquefaciens subsp. plantarum.

Cytology and Genetics. 2016;50(4):251-256
pages 251-256 views

Chromosomal DNA balance in human stem cell line 4BL

Akopyan H.R., Kushniruk V.O., Mykytenko D.O., Huleuk N.L., Kremenskaya Y., Lukash L.L.

Abstract

Ploidy of a chromosome set and some regular structural aberrations in the new human 4BL cell line by passage 205 have been characterized in the previous cytogenetic studies. The purpose of this study was to investigate, using the array CGH and FISH methods, the nature of regular monosomies in particular homologous pairs. Structural aberrations were detected in all the chromosome pairs distinguished as monosomies according to classical cytogenetic analyses. The most notable alterations have been detected in chromosomes 2, 4, 10, 13, and 17. Massive genetic material losses were a probable cause for the monosomy of chromosomes 4, 10, 13, and 17. The monosomy of the second pair of chromosomes was caused by a substantial transformation in one of the homologs typified as multiple duplications and the formation of a derivative—der(2)t(2;?)(q21;?). The application of array CGH aided us in identifying the regions of structural aberrations in chromosomes 2, 4, 10, 13, and 17, that allowed a more accurate identification with the use of the multicolor FISH method. The obtained results confirm the hypothesis concerning a coordinated emergence of deletions and duplications and their stabilizing effect on transformed chromosomes.

Cytology and Genetics. 2016;50(4):257-266
pages 257-266 views

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