1H-NMR Spectroscopy of Blood Plasma for Detection of Changes in Metabolism during the Development of Sarcoma M-1 in Rats
- Авторлар: Egorov A.1, Bykov A.1, Ponomareva T.2, Molchanov M.1, Pankratova N.3, Pankratov A.3, Arakelyan A.1, Koryakin S.4, Timchenko M.1
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Мекемелер:
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences
- Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences
- Institute of Mathematical Problems of Biology, Russian Academy of Sciences − Branch of M.V. Keldysh Institute of Applied Mathematics, Russian Academy of Sciences
- A.F. Tsyba Medical Radiological Research Centre − Branch of the «National Medical Research Radiological Centre», Ministry of Health of the Russian Federation
- Шығарылым: Том 69, № 4 (2024)
- Беттер: 856-867
- Бөлім: Complex systems biophysics
- URL: https://journals.rcsi.science/0006-3029/article/view/264950
- DOI: https://doi.org/10.31857/S0006302924040178
- EDN: https://elibrary.ru/NFUWPX
- ID: 264950
Дәйексөз келтіру
Аннотация
Негізгі сөздер
Авторлар туралы
A. Egorov
Institute of Theoretical and Experimental Biophysics, Russian Academy of SciencesPushchino, Russia
A. Bykov
Institute of Theoretical and Experimental Biophysics, Russian Academy of SciencesPushchino, Russia
T. Ponomareva
Branch of M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of SciencesPushchino, Russia
M. Molchanov
Institute of Theoretical and Experimental Biophysics, Russian Academy of SciencesPushchino, Russia
N. Pankratova
Institute of Mathematical Problems of Biology, Russian Academy of Sciences − Branch of M.V. Keldysh Institute of Applied Mathematics, Russian Academy of SciencesPushchino, Russia
A. Pankratov
Institute of Mathematical Problems of Biology, Russian Academy of Sciences − Branch of M.V. Keldysh Institute of Applied Mathematics, Russian Academy of SciencesPushchino, Russia
A. Arakelyan
Institute of Theoretical and Experimental Biophysics, Russian Academy of SciencesPushchino, Russia
S. Koryakin
A.F. Tsyba Medical Radiological Research Centre − Branch of the «National Medical Research Radiological Centre», Ministry of Health of the Russian FederationObninsk, Russia
M. Timchenko
Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences
Email: maria_timchenko@mail.ru
Pushchino, Russia
Әдебиет тізімі
- Vignoli A., Ghini V., Meoni G., Licari C., Takis P. G., Tenori L., Turano P., and Luchinat C. High-throughput metabolomics by 1D NMR. Angewandte Chemie (Int. ed. in English), 58 (4), 968–994 (2019). doi: 10.1002/anie.201804736
- Larkin J. R., Anthony S., Johanssen V. A., Yeo T., Sealey M., Yates A. G., Smith C. F., Claridge T. D. W., Nicholson B. D., Moreland J. A., Gleeson F., Sibson N. R., Anthony D. C., and Probert F. Metabolomic biomarkers in blood samples identify cancers in a mixed population of patients with nonspecific symptoms. Clin. Cancer Res., 28 (8), 1651–1661 (2022). doi: 10.1158/1078-0432.CCR-21-2855
- Casadei-Gardini A., Del Coco L., Marisi G., Conti F., Rovesti G., Ulivi P., Canale M., Frassineti G. L., Foschi F. G., Longo S., Fanizzi F. P., and Giudetti A. M. 1H-NMR based serum metabolomics highlights different specific biomarkers between early and advanced hepatocellular carcinoma stages. Cancers, 12 (1), 241 (2020). doi: 10.3390/cancers12010241
- Singh A., Prakash V., Gupta N., Kumar A., Kant R., and Kumar D. Serum metabolic disturbances in lung cancer investigated through an elaborative NMR-based serum metabolomics approach. ACS Omega, 7 (6), 5510–5520 (2022). doi: 10.1021/acsomega.1c06941
- Florou V., Nascimento A. G., Gulia A., and de Lima Lopes G. Jr. Global health perspective in sarcomas and other rare cancers. American Society of Clinical Oncology Educational Book (Am. Soc. of Clin. Oncol. Annu. Meet.), 38, 916–924 (2018). doi: 10.1200/EDBK_200589
- Casali P. G., Abecassis N., Aro H. T., Baue S., Biagini R., Bielack S., Bonvalot S., Boukovinas I., Bovee J. V. M. G., Brodowicz T., Broto J. M., Buonadonna A., De Alava E., Dei Tos A. P., Del Muro X. G., Dileo P., Eriksson M., Fedenko A., Ferraresi V., Ferrari A., Ferrari S., Frezza A. M., Gasperoni S., Gelderblom H., Gil T., Grignani G., Gronchi A., Haas R. L., Hassan B., Hohenberger P., Issels R., Joensuu H., Jones R. L., Judson I., Jutte P., Kaal S., Kasper B., Kopeckova K., Krakorova D. A., Le Cesne A., Lugowska I., Merimsky O., Montemurro M., Pantaleo M.A., Piana R., Picci P., Piperno-Neumann S., Pousa A.L., Reichardt P., Robinson M. H., Rutkowski P., Safwat A. A., Schoffski P., Sleijfer S., Stacchiotti S., Sundby Hall K., Unk M., Van Coevorden F., van der Graaf W. T. A., Whelan J., Wardelmann E., Zaikova O., and Blay J. Y. ESMO Guidelines Committee and EURACAN. Soft tissue and visceral sarcomas: ESMO-EURACAN clinical practice guidelines for diagnosis, treatment and follow-up. Annals Oncol., 29 (Suppl. 4), iv51–iv67 (2018). doi: 10.1093/annonc/mdy096
- Chen K., Zhu C., Cai M., Fu D., Cheng B., Cai Z., Li G., and Liu J. Integrative metabolome and transcriptome profiling reveals discordant glycolysis process between osteosarcoma and normal osteoblastic cells. J. Cancer Res. Clin. Oncol., 140 (10), 1715–1721 (2014). doi: 10.1007/s00432-014-1719-y
- Das S., Chatterjee N., Bose D., Banerjee S., Jha T., and Saha K. D. Leishmanial sphingolipid induces apoptosis in Sarcoma 180 cancer cells through regulation of tumour growth via angiogenic switchover. Tumour Biol., 36 (4), 3109–3118 (2015). doi: 10.1007/s13277-014-2947-0
- Lou S., Balluff B., Cleven A. H. G., Bovee J. V. M. G., and McDonnell L. A. Prognostic metabolite biomarkers for soft tissue sarcomas discovered by mass spectrometry imaging. J. Am. Soc. Mass Spectrometry, 28 (2), 376–383 (2017). doi: 10.1007/s13361-016-1544-4
- Shungu D. C., Bhujwalla Z. M., Li S. J., Rose L. M., Wehrle J. P., and Glickson J. D. Determination of absolute phosphate metabolite concentrations in RIF-1 tumors in vivo by 31P-1H-2H NMR spectroscopy using water as an internal intensity reference. Magnetic Resonance in Medicine, 28 (1), 105–121 (1992). doi: 10.1002/mrm.1910280111
- Zhang Z., Qiu Y., Hua Y., Wang Y., Chen T., Zhao A., Chi Y., Pan L., Hu S., Li J., Yang C., Li G., Sun W., Cai Z., and Jia W. Serum and urinary metabonomic study of human osteosarcoma. J. Proteome Res., 9 (9), 4861–4868 (2010). doi: 10.1021/pr100480r
- Lopez-Garrido L., Banuelos-Hernandez A. E., PerezHernandez E., Tecualt-Gomez R., Quiroz-Williams J., Ariza-Castolo A., Becerra-Martinez E., and PerezHernandez N. Metabolic profiling of serum in patients with cartilage tumours using 1H-NMR spectroscopy: A pilot study. Magnetic Resonance in Chemistry, 58 (1), 65–76 (2020). doi: 10.1002/mrc.4925
- Южаков В. В., Севанькаева Л. Е., Ульяненко С. Е., Яковлева Н. Д., Кузнецова М. Н., Цыганова М. Г., Фомина Н. К., Ингель И. Э. и Лычагин А. А. Эффективность фракционированного воздействия γизлучения и быстрых нейтронов на саркому М-1. Радиац. биология. Радиоэкология, 53 (3), 267-279 (2013). doi: 10.7868/S0869803113020148, EDN: QBHSLV
- Kimhofer T. Metabom8 (Version 1.0.0) [Computer software] (2021). URL: https://github.com/tkimhofer/metabom8 (дата обращения: 10.06.2023).
- Dieterle F., Ross A., Schlotterbeck G., and Senn H. Probabilistic quotient normalization as robust method to account for dilution of complex biological mixtures. Application in 1H NMR metabonomics. Anal. Chem., 78 (13), 4281–4290 (2006). doi: 10.1021/ac051632c
- Trygg J., Holmes E., and Lundstedt T. Chemometrics in metabonomics. J. Proteome Res., 6 (2), 469–479 (2007). doi: 10.1021/pr060594q
- Metz C. E. Basic principles of ROC analysis. Seminars in Nuclear Medicine, 8 (4), 283–298 (1978). doi: 10.1016/s0001-2998(78)80014-2
- Esperanca-Martins M., Fernandes I., Soares do Brito J., Macedo D., Vasques H., Serafim T., Costa L., and Dias S. Sarcoma metabolomics: current horizons and future perspectives. Cells, 10 (6), 1432 (2021). doi: 10.3390/cells10061432
- Lai H. S., Lee J. C., Lee P. H., Wang S. T., and ChenW. J. Plasma free amino acid profile in cancer patients. Seminars in Cancer Biology, 15 (4), 267–276 (2005). doi: 10.1016/j.semcancer.2005.04.003
- Altman B. J., Stine Z. E., and Dang C. V. From Krebs to clinic: glutamine metabolism to cancer therapy. Nature Reviews. Cancer, 16 (10), 619–634 (2016). doi: 10.1038/nrc.2016.71
- Xie H., Zhang K., Wei Y., Ruan G., Zhang H., Li S., Song Y., Chen P., Liu L., Wang B., and Shi H. The association of serum betaine concentrations with the risk of new-onset cancers: results from two independent nested case-control studies. Nutrition & Metabolism, 20 (1), 46 (2023). doi: 10.1186/s12986-023-00755-y
- Gruber J., Tang S. Y., Jenner A. M., Mudway I., Blomberg A., Behndig A., Kasiman K., Lee C. Y., Seet R. C., Zhang W., Chen C., Kelly F. J., and Halliwell B. Allantoin in human plasma, serum, and nasallining fluids as a biomarker of oxidative stress: avoiding artifacts and establishing real in vivo concentrations. Antioxidants & Redox Signaling, 11 (8), 1767–1776 (2009). doi: 10.1089/ars.2008.2364