Domain Archaea – system overview, metabolism, biotechnological potential
- Authors: Zmitrovich I.V.1, Perelygin V.V.2, Zharikov M.V.2
-
Affiliations:
- Komarov Botanical Institute of the Russian Academy of Sciences
- Saint Petersburg State Chemical and Pharmaceutical University
- Issue: Vol 5, No 3 (2023)
- Pages: 38-56
- Section: Biological sciences
- URL: https://journals.rcsi.science/PharmForm/article/view/252945
- DOI: https://doi.org/10.17816/phf624404
- ID: 252945
Cite item
Full Text
Abstract
An overview of Archaea, the most ancient domain of life, was carried out. The phylogenetic relationship of Archaea with bacteria and eukaryotes are considered, and the morpho-physiological characteristics of their main groups are given. The biotechnological potential of Archaea is discussed. Cost-effective products of Archaeal biosynthesis are bacterioruberin, squalene, bacteriorhodopsin and diester/tetraether lipids. The production of other metabolic products of Archaea, such as carotenoids, hydrogen, polyhydroxyalkanoates and methane, are in advanced stages of development. While the biological production of methane and hydrogen currently lags behind the profitability of petrochemical plants, research aimed at enhancing the efficiency of this process with the involvement of Archaea holds strategic significance. Archaea also represent a promising target for application in nanotechnology and bioengineering. The aim of the present review is to unveil the biotechnological potential of Archaea, provide an overview of the main groups within this domain, their morphophysiological characteristics, present a generalized metabolite profile of these groups, and outline the spectrum of productions involving these intriguing microorganisms.
Full Text
##article.viewOnOriginalSite##About the authors
Ivan V. Zmitrovich
Komarov Botanical Institute of the Russian Academy of Sciences
Email: iv_zmitrovich@mail.ru
ORCID iD: 0000-0002-3927-2527
SPIN-code: 4155-3190
https://binran.ru/sotrudniki/4926/
D.Sc. in Biology, Leading Researcher, Laboratory of Systematics and Geography of the Fungi
Russian Federation, Saint PetersburgVladimir V. Perelygin
Saint Petersburg State Chemical and Pharmaceutical University
Email: vladimir.pereligin@pharminnotech.com
ORCID iD: 0000-0002-0999-5644
SPIN-code: 3128-7451
Doctor of Medicine (MD), Professor, Head of the Industrial Ecology Department
Russian Federation, Saint PetersburgMikhail V. Zharikov
Saint Petersburg State Chemical and Pharmaceutical University
Author for correspondence.
Email: zharikov.mihail@pharminnotech.com
ORCID iD: 0000-0003-0720-501X
SPIN-code: 7818-7228
Master of the Department of Industrial Ecology
Russian Federation, Saint PetersburgReferences
- Sorokhtin O. G. Globalnaya evolyutsiya Zemli [Global evolution of the Earth]. Izdatelstvo Moskovskogo universiteta, Moscow, 1991 (in Russ).
- Vologdin A. G. Zemlya i zhizn [Earth and life]. Nedra, Moscow, 1976 (in Russ).
- Hayes J. Evolution of the atmosphere. 2020. Encyclopedia Britannica. https://www.britannica.com/topic/evolution-of-the-atmosphere-1703862
- Lovelock J. E. Gaia as seen through the atmosphere. Atmospheric Environment 1972. V. 6. P. 579–580.
- James E.,Lovelock J. E., Margulis L. Atmospheric homeostasis by and for the biosphere: the gaia hypothesis. Tellus. 1974. V. 26. P. 1–2; 2–10. doi: 10.3402/tellusa.v26i1-2.9731
- Offre P., Spang A., Schleper C. Archaea in biogeochemical cycles. Annual Review of Microbiology. 2013. V. 67. P. 437–457. doi: 10.1146/annurev-micro-092412-155614
- Santoro A. E., Richter R. A., Dupont C. L. Planktonic marine Archaea. Annual Review of Marine Svience. 2019. V. 3(11). P. 131–158. doi: 10.1146/annurev-marine-121916-063141
- Koonin E. V. Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier? Philosophical Transactions of the Royal Society. B. Biological Sciences. 2015. V. 370(1678). e20140333. doi: 10.1098/rstb.2014.0333
- Woese C. R., Fox G. E. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proceedings of the National Academy of Sciences of the United States of America. 1977. V. 74(11). P. 5088–5090. doi: 10.1073/pnas.74.11.5088
- Woese C. R., Kandler O., Wheelis M. L. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proceedings of the National Academy of Sciences of the United States of America. 1990. V. 87(12). P. 4576–4579. doi: 10.1073/pnas.87.12.4576
- Kandler O., Hippe H. Lack of peptidoglycan in the cell walls of Methanosarcina barkeri. Archives of Microbiology. 1977. V. 113(1–2). P. 57–60. doi: 10.1007/BF00428580
- Tornabene T. G., Wolfe R. S., Balch W. E., Holzer G., Fox G. E., Oro J. Phytanyl-glycerol ethers and squalenes in the archaebacterium Methanobacterium thermoautotrophicum. Journal of Molecular Evolution. 1978. V. 11(3). P. 259–266. doi: 10.1007/BF01734487
- Cavalier-Smith T. Bacteria and eukaryotes. Nature. 1992. V. 356. P. 570. doi: 10.1038/356570a0
- Stoeckenius W. Walsby’s square bacterium: fine structure of an orthogonal procaryote. Journal of Bacteriology. 1981. V. 148(1). P. 352–360. doi: 10.1128/jb.148.1.352-360.1981
- Keenleyside W. Microbiology: Canadian edition. Pressbooks, Toronto, 2019.
- Jun S. R., Sims G. E., Wu G. A., Kim S. H. Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution. Proceedings of the National Academy of Sciences of the United States of America. 2010. V. 107(1). P. 133–138. doi: 10.1073/pnas.0913033107
- Lane N., Martin W. The energetics of genome complexity. Nature. 2010. V. 467(7318). P. 929–934. doi: 10.1038/nature09486
- Martin W., Koonin E. V. Introns and the origin of nucleus-cytosol compartmentalization. Nature. 2006. V. 440(7080). P. 41–45. doi: 10.1038/nature04531
- López-García P., Moreira D. Selective forces for the origin of the eukaryotic nucleus. Bioessays. 2006. V. 28(5). P. 525–533. doi: 10.1002/bies.20413
- Koonin E. V. The origin of introns and their role in eukaryogenesis: a compromise solution to the introns-early versus introns-late debate? Biology Direct. 2006. V. 1. P. 22 doi: 10.1186/1745-6150-1-22
- Koonin E. V., Makarova K. S., Aravind L. Horizontal gene transfer in prokaryotes: quantification and classification. Annual Review of Microbiology. 2001. V. 55. P. 709–742. doi: 10.1146/annurev.micro.55.1.709
- Wolf Y. I., Makarova K. S., Yutin N., Koonin E. V. Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer. Biology Direct. 2012. V. 7. P. 46. doi: 10.1186/1745-6150-7-46
- Wolf Y. I., Koonin E. V. Genome reduction as the dominant mode of evolution. Bioessays. 2013. V. 35(9). P. 829–837. doi: 10.1002/bies.201300037
- Cavalier-Smith T. A 6-kingdom classification and a unified phylogeny. In: H.E.A. Schenk, W. Schwemmler (eds). Endocytobiology II. De Gruyter, Berlin, 1983, pp. 1027–1034.
- Philippe H., Adoutte A. The molecular phylogeny of Eukaryota: solid facts and uncertainties. In: G. Coombs, K. Vickerman, M. Sleigh, A. Warren (eds). Evolutionary relationships among Protozoa. Chapman and Hall, London, 1998, pp. 25−56.
- Baldauf S. L. The deep roots of eukaryotes. Science. 2003 V. 300(5626). P. 1703–1706. doi: 10.1126/science.1085544
- Cavalier-Smith T., Chao E. E., Lewis R. Multiple origins of Heliozoa from flagellate ancestors: New cryptist subphylum Corbihelia, superclass Corbistoma, and monophyly of Haptista, Cryptista, Hacrobia and Chromista. Molecular Phylogenetics and Evolution. 2015. V. 93. P. 331–362. doi: 10.1016/j.ympev.2015.07.004
- Strassert J. F. H., Irisarri I., Williams T. A., Burki F. A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids. Nature Communications. 2021. V. 12(1). P. 1879. doi: 10.1038/s41467-021-22044-z
- Al Jewari C., Baldauf S. L. An excavate root for the eukaryote tree of life. Science Advances. 2023. V. 9(17). eade4973. doi: 10.1126/sciadv.ade4973
- Chow C., Padda K. P., Puri A., Chanway C. P. An archaic approach to a modern issue: endophytic Archaea for sustainable agriculture. Current Microbiology. 2022. V. 79(11). P. 322. doi: 10.1007/s00284-022-03016-y
- Bang C., Schmitz R. A. Archaea associated with human surfaces: not to be underestimated. FEMS Microbiol Reviews. 2015. V. 39(5). P. 631–648. doi: 10.1093/femsre/fuv010
- Moissl-Eichinger C., Pausan M., Taffner J., Berg G., Bang C., Schmitz R. A. Archaea are interactive components of complex microbiomes. Trends in Microbiology. 2018. V. 26(1). P. 70–85. doi: 10.1016/j.tim.2017.07.004
- McCalley C. K., Woodcroft B. J., Hodgkins S. B., Wehr R. A., Kim E. H., Mondav R., Crill P. M., Chanton J. P., Rich V. I., Tyson G. W., Saleska S. R. Methane dynamics regulated by microbial community response to permafrost thaw. Nature. 2014. V. 514(7523). P. 478–481. doi: 10.1038/nature13798
- Stieglmeier M., Alves R. J. E., Schleper C. The phylum Thaumarchaeota. In: E. Rosenberg, E. F. DeLong, S. Lory, E. Stackebrandt, F. Thompson (eds). The Prokaryotes. Springer, Berlin, Heidelberg, 2014. doi: 10.1007/978-3-642-38954-2_338
- McGenity T. J., Grant W. D., Kamekura M. Genus X. Natrinema McGenity, Gemmell et Grant 1998, 1194VP. In: D. R. Boone, R. W. Castenholz, G. M. Garrity (eds). Bergey’s manual of systematic bacteriology. V. 1. The Archaea and the deeply branching and phototrophic bacteria. Springer, N.Y., 2001, pp. 327–329.
- Rosenberg E. (ed.). The Prokaryotes. Other major lineages of Bacteria and the Archaea. Springer, N.Y. etc., 2014, pp. 1–1028.
- Garrity G. M.,Holt J. G. Class V I. Archaeoglobi. In: D. R. Boone, R. W. Castenholz, G. M. Garrity (eds). Bergey’s manual of systematic bacteriology. V. 1, 2nd edn. Springer, N.Y., 2001, pp. 349–353.
- Martin M. R., Fornero J. J., Stark R., Mets L., Angenent L. T. A single-culture bioprocess of Methanothermobacter thermautotrophicus to upgrade digester biogas by CO2-to-CH4 conversion with H2. Archaea. 2013. e157529. doi: 10.1155/2013/157529
- Rittmann S. K. M. R., Seifert A. H., Krajete A. Biomethanisierung – ein Prozess zur Ermöglichung der Energiewende? Biospektrum. 2014. V. 20. P. 816–817. doi: 10.1007/s12268-014-0521-3
- Seifert A. H., Rittmann S., Herwig C. Analysis of process related factors to increase volumetric productivity and quality of biomethane with Methanothermobacter marburgensis. Applied Energy. 2014. V. 132, pp. 155–162. doi: 10.1016/j.apenergy.2014.07.002
- Taubner R. S., Pappenreiter P., Zwicker J., Smrzka D., Pruckner C., Kolar P., Bernacchi S., Seifert A. H., Krajete A., Bach W., Peckmann J., Paulik C., Firneis M. G., Schleper C., Rittmann S. K. M. R. Biological methane production under putative Enceladus-like conditions. Nature Communications. 2018. V. 9(1). doi: 10.1038/s41467-018-02876-y
- Hoffarth M. P., Broeker T., Schneider J. Effect of N2 on biological methanation in a continuous stirred-tank reactor with Methanothermobacter marburgensis. Fermentation. 2019. V. 5(56). doi: 10.3390/fermentation5030056
- Nishimura N., Kitaura S., Mimura A., Takahara Y. Cultivation of thermophilic methanogen KN-15 on H2 – CO2 under pressurized conditions. Journal of Fermentation and Bioingeneering. 1992. V. 73. P. 477–480. doi: 10.1016/0922-338X(92)90141-G
- Jee H. S., Nishio N., Nagai S. CH4 production from H2 and CO2 by Methanobacterium thermoautotrophicum cells fixed on hollow fibers. Biotechnology Letters. 1988. V. 10. P. 243–248. doi: 10.1007/BF01024413
- Jee H. S., Yano T., Nishio N., Nagai S. Biomethanation of H2 and CO2 by Methanobacterium thermoautotrophicum in membrane and ceramic bioreactors. Journal of Fermentation Technology. 1987. V. 65. P. 413–418. doi: 10.1016/0385-6380(87)90137-3
- Pappenreiter P. A., Zwirtmayr S., Mauerhofer L. M., Rittmann S. K. R., Paulik C. Development of a simultaneous bioreactor system for characterization of gas production kinetics of methanogenic archaea at high pressure. Engineering in Life Sciences. 2019. V. 19(7). P. 537–544. doi: 10.1002/elsc.201900035
- Abdel Azim A., Rittmann S. K. R., Fino D., Bochmann G. The physiological effect of heavy metals and volatile fatty acids on Methanococcus maripaludis S2. Biotechnology for Biofuels and Bioproducts. 2018. V. 11. P. 301. doi: 10.1186/s13068-018-1302-x
- Pfeifer K., Ergal İ., Koller M., Basen M., Schuster B., Rittmann S. K. R. Archaea biotechnology. Biotecnology Advances. 2021. V. 47. e107668. doi: 10.1016/j.biotechadv.2020.107668
- Stolten D. Hydrogen and fuel cells: fundamentals, technologies and applications. John Wiley and Sons, Hoboken etc., 2010.
- Handelsblatt. Drei-Phasen-Plan: Die Wasserstoff-Welt der Zukunft: So will die EU das Energiesystem umbauen. 2020 https://www.handelsblatt.com/unternehmen/energie/drei-phasen-plan-die-wasserstoff-welt-der-zukunft-so-will-die-eu-das-energiesystem-umbauen/25984390.html
- Fiala G., Stetter K. O. Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100°C. Archives of Microbiology. 1986. V. 145. P. 56–61. doi: 10.1007/BF00413027
- Bálint B., Bagi Z., Tóth A., Rákhely G., Perei K., Kovács K. L. Utilization of keratin-containing biowaste to produce biohydrogen. Applied Microbiology and Biotechnology. 2005. V. 69(4). P. 404–410. doi: 10.1007/s00253-005-1993-3
- Bae S. S., Kim T. W., Lee H. S., Kwon K. K., Kim Y. J., Kim M. S., Lee J. H., Kang S. G. H2 production from CO, formiate or starch using the hyperthermophilic archaeon, Thermococcus onnurineus. Biotechnology Letters. 2012. V. 34(1). P. 75–79. doi: 10.1007/s10529-011-0732-3
- Ergal İ., Fuchs W., Hasibar B., Thallinger B., Bochmann G., Rittmann S. K. R. The physiology and biotechnology of dark fermentative biohydrogen production. Biotecnology Advances. 2018. V. 36(8). P. 2165–2186. doi: 10.1016/j.biotechadv.2018.10.005
- Oslowski D. M., Jung J. H., Seo D. H., Park C. S., Holden J. F. Production of hydrogen from α-1,4- and β-1,4-linked saccharides by marine hyperthermophilic Archaea. Applied and Environmental Microbiology. 2011. V. 77(10). P. 3169–3173. doi: 10.1128/AEM.01366-10
- Müller V. New horizons in acetogenic conversion of one-carbon substrates and biological hydrogen storage. Trends in Biotechnologyogy. 2019. V. 37(12). P. 1344–1354. doi: 10.1016/j.tibtech.2019.05.008
- Bhattacharyya A., Jana K., Haldar S., Bhowmic A., Mukhopadhyay U. K., De S., Mukherjee J. Integration of poly-3-(hydroxybutyrate-co-hydroxyvalerate) production by Haloferax mediterranei through utilization of stillage from rice-based ethanol manufacture in India and its techno-economic analysis. World Journal of Microbiology and Biotechnology. 2015. V. 31(5). P. 717–727. doi: 10.1007/s11274-015-1823-4
- Koller M., Puppi D., Chiellini F., Braunegg G. Comparing chemical and enzymatic hydrolysis of whey lactose to generate feedstocks for haloarchaeal poly(3-hydroxybutyrate-co-3-hydroxyvalerate) biosynthesis. International Journal of Pharmaceutical Sciences Review and Research. 2016. V. 3. P. 112. doi: 10.15344/2394-1502/2016/112
- Pais J., Serafim L. S., Freitas F., Reis M. A. Conversion of cheese whey into poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by Haloferax mediterranei. New Biotechnology. 2016. V. 33(1). P. 224–230. doi: 10.1016/j.nbt.2015.06.001
- Pramanik A., Mitra A., Arumugam M., Bhattacharyya A., Sadhukhan S., Ray A., Haldar S., Mukhopadhyay U. K., Mukherjee J. Utilization of vinasse for the production of polyhydroxybutyrate by Haloarcula marismortui. Folia Microbiologica. 2012. V. 57(1). P. 71–79. doi: 10.1007/s12223-011-0092-3
- Koller M., Bona R., Braunegg G., Hermann C., Horvat P., Kroutil M., Martinz J., Neto J., Pereira L., Varila P. Production of polyhydroxyalkanoates from agricultural waste and surplus materials. Biomacromolecules. 2005. V. 6(2). P. 561–565. doi: 10.1021/bm049478b
- Taran M. Utilization of petrochemical wastewater for the production of poly(3-hydroxybutyrate) by Haloarcula sp. IRU1. Journal of Hazardous Materials. 2011. V. 188(1–3). P. 26–28. doi: 10.1016/j.jhazmat.2011.01.036
- Amaro T. M. M. M., Rosa D., Comi G., Iacumin L. Prospects for the use of whey for polyhydroxyalkanoate (PHA) production. Frontiers in Microbiology. 2019. V. 10. P. 992. doi: 10.3389/fmicb.2019.00992
- Armstrong R. E., Warner J.B. Biology and the battlefield. Defence Horizons. 2003. N 25. P. 1–8.
- Khaled M., Knopf G. K., Bassi A. S. Organic photovoltaic cells based on photoactive bacteriorhodopsin proteins. In: Proc. SPIE 8615, Microfluidics, BioMEMS, and Medical Microsystems XI, 86150Q. 2013. doi: 10.1117/12.2004018
- Bertoncello P., Nicolini D., Paternolli C., Bavastrello V., Nicolini C. Bacteriorhodopsin-based langmuir-schaefer films for solar energy capture. IEEE Transactions on NanoBioscience. 2003. V. 2(2). P. 124–132. doi: 10.1109/tnb.2003.813940
- Das S., Wu C., Song Z., Hou Y., Koch R., Somasundaran P., Priya S., Barbiellini B., Venkatesan R. Bacteriorhodopsin enhances efficiency of Perovskite solar cells. ACS Applied Materials and Interfaces. 2019. V. 11(34). P. 30728–30734. doi: 10.1021/acsami.9b06372
- Mandelli F., Miranda V. S., Rodrigues E., Mercadante A. Z. Identification of carotenoids with high antioxidant capacity produced by extremophile microorganisms. World Journal of Microbiology and Biotechnology. 2012. V. 28(4). P. 1781–1790. doi: 10.1007/s11274-011-0993-y
- Rammuni M. N., Ariyadasa T. U., Nimarshana P. H. V., Attalage R. A. Comparative assessment on the extraction of carotenoids from microalgal sources: astaxanthin from H. pluvialis and β-carotene from D. salina. Food Chemistry. 2019. V. 277. P. 128–134. doi: 10.1016/j.foodchem.2018.10.066
- Jehlička J., Edwards H. G., Oren A. Bacterioruberin and salinixanthin carotenoids of extremely halophilic Archaea and Bacteria: a Raman spectroscopic study. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 2013. V. 106. P. 99–103. doi: 10.1016/j.saa.2012.12.081
- Naziri D., Hamidi M., Hassanzadeh S., Tarhriz V., Maleki Zanjani B., Nazemyieh H., Hejazi M. A., Hejazi M. S. Analysis of carotenoid production by Halorubrum sp. TBZ126; an extremely halophilic archeon from Urmia lake. Advanced Pharmaceutical Bulletin. 2014. V. 4(1). P. 61–67. doi: 10.5681/apb.2014.010
- Baumann L. M. F., Taubner R. S., Bauersachs T., Steiner M., Schleper C., Peckmann J., Birgel D. Intact polar lipid and core lipid inventory of the hydrothermal vent methanogens Methanocaldococcus villosus and Methanothermococcus okinawensis. Organic Geochemistry. 2018. doi: 10.1016/j.orggeochem.2018.10
- Gilmore S. F., Yao A. I., Tietel Z., Kind T., Facciotti M. T., Parikh A. N. Role of squalene in the organization of monolayers derived from lipid extracts of Halobacterium salinarum. Langmuir. 2013. V. 29(25). P. 7922–7930. doi: 10.1021/la401412t
- Engelhardt H. Mechanism of osmoprotection by archaeal S-layers: a theoretical study. Journal of Structural Biology. 2007. V. 160(2). P. 190–199. doi: 10.1016/j.jsb.2007.08.004
- Zink I. A., Pfeifer K., Wimmer E., Sleytr U. B., Schuster B., Schleper C. CRISPR-mediated gene silencing reveals involvement of the archaeal S-layer in cell division and virus infection. Nature Communications. 2019. V. 10(1). P. 4797. doi: 10.1038/s41467-019-12745-x
- Schuster B., Sleytr U. B. Relevance of glycosylation of S-layer proteins for cell surface properties. Acta Biomaterialia. 2015. V. 19. P. 149–157. doi: 10.1016/j.actbio.2015.03.020
- Douglas K., Devaud G., Clark N. A. Transfer of biologically derived nanometer-scale patterns to smooth substrates. Science. 1992. V. 257(5070). P. 642–644. doi: 10.1126/science.257.5070.642
- Winningham T. A., Whipple S. G., Douglas K. Pattern transfer from a biomolecular nanomask to a substrate via an intermediate transfer layer. Journal of Vacuum Science and Technology. B. Microelectronics and Nanometer Structures Processing Measurement and Phenomena. 2001. V. 19. P. 1796–1802. doi: 10.1116/1.1396643
- Bulte J. W. M. Gas vesicles as collapsible MRI contrast agents. Nature Materials. 2018. V. 17(5). P. 386–387. doi: 10.1038/s41563-018-0073-x
- DasSarma P., Negi V. D., Balakrishnan A., Kim J. M., Karan R., Chakravortty D., DasSarma S. Haloarchaeal gas vesicle nanoparticles displaying Salmonella antigens as a novel approach to vaccine development. Procedia in Vaccinology. 2015. V. 9. P. 16–23. doi: 10.1016/j.provac.2015.05.003
- Farhadi A., Ho G., Kunth M., Ling B., Lakshmanan A., Lu G., Bourdeau R. W., Schröder L., Shapiro M. G. Recombinantly expressed gas vesicles as nanoscale contrast agents for ultrasound and hyperpolarized MRI. AIChE Journal. 2018. V. 64(8). P. 2927–2933. doi: 10.1002/aic.16138
- Krishnan L., Sprott D. G. Archaeosomes as self-adjuvanting delivery systems for cancer vaccines. Journal of Drug Targeting. 2003. V. 11(8–10). P. 515–524. doi: 10.1080/10611860410001670044
- Akache B., Stark F. C., Jia Y., Deschatelets L., Dudani R., Harrison B. A., Agbayani G., Williams D., Jamshidi M. P., Krishnan L., McCluskie M. J. Sulfated archaeol glycolipids: comparison with other immunological adjuvants in mice. PLoS One. 2018. V. 13(12).e0208067. doi: 10.1371/journal.pone.0208067
- Li Z., Chen J., Sun W., Xu Y. Investigation of archaeosomes as carriers for oral delivery of peptides. Biochemical and Biophysical Research Communications. 2010. V. 394(2). P. 412–417. doi: 10.1016/j.bbrc.2010.03.041
- Littlechild J. A. Thermophilic archaeal enzymes and applications in biocatalysis. Biochemical Society Transactions. 2011. V. 39(1). P. 155–158. doi: 10.1042/BST0390155
- Martínez-Espinosa R. M. Heterologous and homologous expression of proteins from Haloarchaea: denitrification as case of study. International Journal of Molecular Sciences. 2019. V. 21(1). P. 82. doi: 10.3390/ijms21010082
- Alsafadi D., Al-Mashaqbeh O. A one-stage cultivation process for the production of poly-3-(hydroxybutyrate-co-hydroxyvalerate) from olive mill wastewater by Haloferax mediterranei. New Biotechnology. 2017. V. 34. 47–53. doi: 10.1016/j.nbt.2016.05.003
- Karan R., Capes M. D., DasSarma P., DasSarma S. Cloning, overexpression, purification, and characterization of a polyextremophilic β-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi. BMC Biotechnology. 2013. V. 13. P. 3. doi: 10.1186/1472-6750-13-3
- Lobasso S., Vitale R., Lopalco P., Corcelli A. Haloferax volcanii, as a novel tool for producing mammalian olfactory receptors embedded in archaeal lipid bilayer. Life. 2015. V. 5(1). P. 770–782. doi: 10.3390/life5010770
- Fathollahzadeh H., Eksteen J. J., Kaksonen A. H., Watkin E. L. J. Role of microorganisms in bioleaching of rare earth elements from primary and secondary resources. Applied Microbiology and Biotechnology. 2019. V. 103(3). P. 1043–1057. doi: 10.1007/s00253-018-9526-z
- Konishi Y., Tokushige M., Asai S. Bioleaching of chalcopyrite concentrate by acidophilic thermophile Acidianus brierleyi. In: R. Amils, A. Ballester (eds). Process metallurgy, biohydrometallurgy and the environment toward the mining of the 21 century – proceedings of the International Biohydrometallurgy Symposium, Elsevier, 1999, pp. 367–376. doi: 10.1016/S1572-4409(99)80037-6
- Howard D., Crundwell F. K. A kinetic study of the leaching of chalcopyrite with Sulfolobus metallicus. In: R. Amils, A. Ballester (eds). Process metallurgy, biohydrometallurgy and the environment toward the mining of the 21 century – proceedings of the International Biohydrometallurgy Symposium, Elsevier, 1999, pp. 209–217. doi: 10.1016/S1572-4409(99)80020-0
- Auernik K. S., Kelly R. M. Impact of molecular hydrogen on chalcopyrite bioleaching by the extremely thermoacidophilic archaeon Metallosphaera sedula. Applied and Environmental Microbiology. 2010. V. 76(8). P. 2668–2672. doi: 10.1128/AEM.02016-09
- Blazevic A., Albu M., Mitsche S., Rittmann S. K. R., Habler G., Milojevic T. Biotransformation of scheelite CaWO4 by the extreme thermoacidophile Metallosphaera sedula: tungsten-microbial interface. Frontiers in Microbiology. 2019. V. 10. P. 1492. doi: 10.3389/fmicb.2019.01492