Intraspecific variabilityof the norway rats (Rattus norvegicus) in Russia according to D-loop mtDNA data

А. N. Maltsev; Мальцев А. Н.; I. V. Kartavtseva; Картавцева И. В.; V. V. Stakheev; Стахеев В. В.; V. Y. Komarov; Комаров В. Ю.; Y. А. Bazhenov; Баженов Ю. А.; L. А. Khlyap; Хляп Л. А.; Е. V. Kotenkova; Котенкова Е. В.

doi:10.31857/S2686738924050096

Intraspecific variabilityof the norway rats (Rattus norvegicus) in Russia according to D-loop mtDNA data

Authors: Maltsev А.N.¹^,2, Kartavtseva I.V.³, Stakheev V.V.⁴, Komarov V.Y.⁵, Bazhenov Y.А.⁶, Khlyap L.А.¹, Kotenkova Е.V.¹
Affiliations:
1. Severtsov Institute of Problems of Ecology and Evolution, Russian Academy of Sciences
2. Erisman Research Institute of Disinfectology,Federal Service for Surveillance on Consumer Rights Protection and Human Wellbeing
3. Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far East Branch, Russian Academy of Sciences
4. Southern Research Center, Russian Academy of Sciences
5. Erisman Research Institute of Disinfectology,Federal Service for Rostov-on-Don Surveillance on Consumer Rights Protection and Human Wellbeing
6. Institute of Natural Resources, Ecology and Cryology, Siberian Branch, Russian Academy of Sciences
Issue: Vol 518, No 1 (2024)
Pages: 53-57
Section: Articles
URL: https://journals.rcsi.science/2686-7389/article/view/273256
DOI: https://doi.org/10.31857/S2686738924050096
ID: 273256

Cite item

Full Text

Open Access
Restricted Access

Access granted
Restricted Access

Subscription Access

Abstract

For the first time in Russia, a study of the intraspecific structure of the brown rat (Rattus norvegicus) was carried out using the mitochondrial marker of the control region (D-loop) of mtDNA. MtDNA sequences of brown rats from 8 regions of the European and Asian parts of Russia were analyzed. Three clades of rats have been identified: in the European part of Russia –1, in the Asian part – 2. Synanthropic subspecies – R. n. norvegicus is represented by european and asian lineages. The european lineage included haplotypes from the regions of central and southern Russia, and the Asian lineage included haplotypes from Eastern Siberia and the Far East. The previously described free living subspecies, R. n. caraco from the Russian Far East was represented as separate genetic lineage.

Keywords

brown rat, intraspecific structure, D-loop mtDNA, Rattus norvegicus, R. n. norvegicus, R. n. caraco

References

Kucheruk V.V. Synanthropic rodents and their significance in the transmission of infections // Theoretical questions of natural foci diseases. Prague, 1965. P.353–366.
Кучерук В.В., Кузиков И.В. Современный ареал серой крысы // Распространение и экология серой крысы и методы ограничения ее численности. М.: Наука.1985. С.17–52.
Петросян В.Г., Хляп Л.А. Самые опасные инвазионные виды России (ТОП-100) / Ред. Дгебуадзе Ю.Ю., Петросян В.Г., Хляп Л.А. М.: Т-во научных изданий КМК, 2018. 688 с.
Hedrich H.J. History, Strains and Models. In: Krinke GJ, Buton T, editors. The laboratory Rat (Handbook of Experimental Animals). London: Academic. Press, 2000. P. 1871–1895.
Wu X., Wang Y. Fossil materials and migrations of Mus musculus and Rattus norvegicus // Research of China’s Frontier Archaeology. 2012. V.1. P. 1–9.
Song Y., Lan Z., Kohn M.H. Mitochondrial DNA phylogeography of the Norway rat // PLOS ONE. 2014. V. 9. Issue 2. https://doi.org/10.1371/journal.pone.0088425.
Zeng L., Ming C., Li Y.,Su L-Y., Su Y-H., et al. Out of Southern East Asia of the Brown Rat Revealed by Large-Scale Genome Sequencing // Molecular Biology Evolution. V. 35. P. 149–158.
Кащенко Н.Ф. Крысы и их заместители в Западной Сибири и Туркестане // Ежегодник зоол. Музея АН. 1912 (1913). Т. 17. С. 370–390.
Puckett E.E., Magnussen E., Khlyap L.A, Strand T.M., Lundkvist A., Munshi-South J. Genomic analyses reveal three independent introductions of the invasive brown rat (Rattus norvegicus) to the Faroe Islands // Heredity, 2020. V.124. P. 15–27.
Wu D. On subspecific differentiation of brown rat (Rattus norvegicus Berkenhout) in China // Acta Theriologica Sinica, 1982. V. 2. P. 107–112.
Wang Y.A. Сomplete checklist of mammal species and subspecies in China: a taxonomic and geographic reference. Beijing: China Forestry Publishing House. 2003. 394 p.
Zhao L., Zhang J-X., Zhang Y.-H. Genetic boundary and gene flow between two parapatric subspecies of brown rats // Current Zoology. 2020. V. 66. P. 677–688.
Аргиропуло А.И. Фауна СССР. Млекопитающие. Семейство Muridae – мыши. M.; Л.: Изд-во АН ССР, 1940. Т. 3. вып.5. 170 с.
Вигоров Ю.Л. Сравнительная экология и изменчивость крыс Евразии. Екатеринбург: Наука, Урал. отделение, 1992. 144 с.
Lack J., Hamilton M., Braun J., Mares M., Van Den Bussche R. Comparative phylogeography of invasive Rattus rattus and Rattus norvegicus in the U.S. reveals distinct colonization histories and dispersal // Biological Invasions. 2013. V.15. P. 1067–1087.
Puckett E.E., Park J., Combs M. et al. Global population divergence and admixture of the brown rat (Rattus norvegicus) // Proceedings of the Royal Society B: Biological Sciences. 2016. V. 283(1841).20161762.doi: 10.1098/rspb.2016.1762.
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT // Nucleic Acids Symposium Series. 1999. V. 41. P. 95–98.
Bandelt H-J., Forster P., Röhl A. Median-Joining Networks for Inferring Intraspecific Phylogenies // Molecular Biology Evolution. 1999. V. 16(1). P. 37–48.
Kumar S., Stecher G., Li M., Knyaz C., Tamura K. Mega X: Molecular evolutionary genetics analysis across computing platforms // Molecular Biology Evolution. 2018.V. 35. P. 1547–1549.doi: 10.1093/molbev/msy096

Supplementary files

Supplementary Files

Action

1. JATS XML

Download

Username
Password
Remember me

Forgot password?	Register

Username
Password
Remember me

Forgot password?	Register

Vol 520, No 1 (2025)

Intraspecific variabilityof the norway rats (Rattus norvegicus) in Russia according to D-loop mtDNA data

Full Text

Abstract

Keywords

About the authors

А. N. Maltsev

I. V. Kartavtseva

V. V. Stakheev

V. Y. Komarov

Y. А. Bazhenov

L. А. Khlyap

Е. V. Kotenkova

References

Supplementary files