Leaf disease recognition using deep learning methods
- Authors: Muthana A.S.1, Lyapuntsova E.V.1
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Affiliations:
- National University of Science and Technology MISIS
- Issue: Vol 33, No 4 (2025)
- Pages: 361-373
- Section: Computer Science
- URL: https://journals.rcsi.science/2658-4670/article/view/356899
- DOI: https://doi.org/10.22363/2658-4670-2025-33-4-361-373
- EDN: https://elibrary.ru/HYUCMC
- ID: 356899
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Abstract
The digitalization of crop production has placed leaf-image-based disease recognition among the top research priorities. This paper presents a compact and reproducible system designed for rapid deployment in cloud environments and subsequent adaptation. The proposed approach combines multitask learning (simultaneous prediction of plant species and disease), physiologically motivated channel processing, and error-tolerant data preparation procedures. Experiments were conducted on the New Plant Diseases Dataset (Augmented). To accelerate training, six of the most represented classes were selected, with up to 120 images per class. Images were resized to 192×192 and augmented with geometric and color transformations as well as soft synthetic lesion patches. The ExG greenness index was embedded into the green channel of the input image. The architecture was based on EfficientNet-B0; the proposed HiP²-Net model included two classification heads for disease and species. Training was carried out in two short stages, with partial unfreezing of the base network’s tail in the second stage. Evaluation employed standard metrics, confusion matrices, test-time augmentation, and integrated gradients maps for explainability. On the constructed subset, the multitask HiP²-Net consistently outperformed the frozen baseline model in accuracy and aggregate metrics. Synthetic lesions reduced background sensitivity and improved detection of mild infections, while incorporating ExG enhanced leaf tissue separation under variable lighting. Integrated gradient maps highlighted leaf veins and necrotic spots, strengthening trust in predictions and facilitating expert interpretation. The proposed scheme combines the practicality of cloud deployment with simple, physiology-inspired techniques. Adopting the “species + disease” setup together with ExG preprocessing and soft synthetic lesions improves robustness to lighting, background, and geometric variations, and makes it easier to transfer models to new image collections.
About the authors
Ali Salem Muthana
National University of Science and Technology MISIS
Email: m2112648@edu.misis.ru
ORCID iD: 0000-0003-4304-7469
PhD Student
Russian Federation, 44 building 2 Vavilova St, Moscow, 119049, Russian FederationElena V. Lyapuntsova
National University of Science and Technology MISIS
Author for correspondence.
Email: lev77@me.com
ORCID iD: 0000-0002-3420-3805
Professor
Russian Federation, 44 building 2 Vavilova St, Moscow, 119049, Russian FederationReferences
- Chen, R., Qi, H., Liang, Y. & Yang, M. Identification of plant leaf diseases by deep learning based on channel attention and channel pruning. Frontiers in Plant Science 13 (2022).
- El Fatimi, E. H. Leaf diseases detection using deep learning methods. arXivpreprint. 31 December 2024 (2024).
- Gupta, A., Garg, P., Thakur, D. & Palit, R. Plant Disease Detection Using Deep Learning in Proceedings of the Fifth Congress on Intelligent Systems (CIS 2024) 1277 (2025), 373–384.
- Russel, N. S. & Selvaraj, A. Leaf species and disease classification using multiscale parallel deep CNN architecture. Neural Computing and Applications 34, 19217–19237 (2022).
- Shoaib, M., Shah, B., El-Sappagh, S., Ali, A., et al. An advanced deep learning models-based plant disease detection: A review of recent research. Plant Bioinformatics 14 (2023).
- Yang, B.,Wang, Z., Guo, J., Guo, L., etal. Identifying plant disease and severity from leaves: A deep multitask learning framework using triple-branch Swin Transformer and deep supervision. Computers and Electronics in Agriculture 209, 107809 (2023).
- Sundhar, S., Sharma, R., Maheshwari, P., Kumar, S. R. & Kumar, T. S. Enhancing Leaf Disease Classification Using GAT-GCN Hybrid Model. arXiv preprint. 7 April 2025 (2025).
- Romiyal, G., Selvarajah, T., Roshan, G., Kayathiri, M., et al. Past, present and future of deep plant leaf disease recognition: A survey. Computers and Electronics in Agriculture 234, 110128. doi: 10.1016/j.compag.2025.110128 (2025).
- Tunio, M. H., Li, J., Zeng, X., Ahmed, A., etal. Advancing plant disease classification: A robust and generalized approach with transformer-fused convolution and Wasserstein domain adaptation. Computers and Electronics in Agriculture 226, 109574 (2024).
- Lu, F., Shangguan, H., Yuan, Y., Yan, Z., et al. LeafConvNeXt: Enhancing plant disease classification for the future of unmanned farming. Computers and Electronics in Agriculture 233, 110165 (2025).
- Zhang, E., Zhang, N. & Lv, C. A lightweight dual-attention network for tomato leaf disease identification. Frontiers in Plant Science 15, 1420584 (2024).
- Yao, J., Tran, S. N., Garg, S. & Sawyer, S. Deep Learning for Plant Identification and Disease Classification from Leaf Images: Multi-prediction Approaches. arXiv preprint. 25 October 2023 (2023).
- Indira, K. & Mallika, H. Classification of Plant Leaf Disease Using Deep Learning. Journal of The Institution of Engineers (India): Series B 105, 609–620 (2024).
- Deng, H., Luo, D., Zhou, Z., Hou, J., et al. Leaf disease recognition based on channel information attention network. Multimedia Tools and Applications 83, 6601–6619 (2024).
- Khan, M. A., Huss, Khan, M. S., et al. Deep learning-based segmentation and classification of leaf images for detection of tomato plant disease. Frontiers in Plant Science 13, 1031748 (2022).
- Chen, W., Chen, J., Duan, R., Fang, Y., et al. MS-DNet: A mobile neural network for plant disease identification. Computers and Electronics in Agriculture 199, 107175 (2022).
- Quan, S., Wang, J., Jia, Z., Yang, M. & Xu, Q. MS-Net: a novel lightweight and precise model for plant disease identification. Frontiers in Plant Science 14, 1276728 (2023).
- Shafik, W., Tufail, A., Liyanage, C. D. S. & Apong, R. A. A. H. M. Using transfer learning-based plant disease classification and detection for sustainable agriculture. BMC Plant Biology 24, 136 (2024).
- Zhang, Z. &Wang, H. MAFDE-DN4: Improved few-shot plant disease classification method based on meta-learning. Computers and Electronics in Agriculture 225, 109540 (2024).
- Li, H., Zhang, Z., Zhou, P., et al. An Effective Image Classification Method for Plant Diseases with Improved Channel Attention (aECAnet). Symmetry 16, 451 (2024).
- Zhang, Y., Ren, P., Fu, X., et al. Improving plant disease classification using realistic data augmentation. Multimedia Tools and Applications 83, 37703–37723 (2024).
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