Small-angle scattering study of Aspergillus awamori glycoprotein glucoamylase


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Glucoamylase from fungus Aspergillus awamori is glycoside hydrolase that catalyzes the hydrolysis of α-1,4- and α-1,6-glucosidic bonds in glucose polymers and oligomers. This glycoprotein consists of a catalytic domain and a starch-binding domain connected by an O-glycosylated polypeptide chain. The conformation of the linker, the relative arrangement of the domains, and the structure of the full-length enzyme are unknown. The structure of the recombinant glucoamylase GA1 was studied by molecular modelling and small-angle neutron scattering (SANS) methods. The experimental SANS data provide evidence that glucoamylase exists as a monomer in solution and contains a glycoside component, which makes a substantial contribution to the scattering. The model of full-length glucoamylase, which was calculated without taking into account the effect of glycosylation, is consistent with the experimental data and has a radius of gyration of 33.4 ± 0.6 Å.

Sobre autores

A. Schmidt

Konstantinov Petersburg Nuclear Physics Institute

Autor responsável pela correspondência
Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300

A. Shvetsov

Konstantinov Petersburg Nuclear Physics Institute; St. Petersburg State Polytechnical University

Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300; Politekhnicheskaya ul. 29, St. Petersburg, 195251

A. Kuklin

Joint Institute for Nuclear Research; Research-Educational Centre “Bionanophysics”

Email: schmidt@omrb.pnpi.spb.ru
Rússia, ul. Joliot-Curie 6, Dubna, Moscow region, 141980; Institutskii per. 9, Dolgoprudny, Moscow region, 141700

D. Lebedev

Konstantinov Petersburg Nuclear Physics Institute

Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300

M. Surzhik

Konstantinov Petersburg Nuclear Physics Institute; St. Petersburg State Polytechnical University

Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300; Politekhnicheskaya ul. 29, St. Petersburg, 195251

V. Sergeev

Konstantinov Petersburg Nuclear Physics Institute; St. Petersburg State Polytechnical University

Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300; Politekhnicheskaya ul. 29, St. Petersburg, 195251

V. Isaev-Ivanov

Konstantinov Petersburg Nuclear Physics Institute

Email: schmidt@omrb.pnpi.spb.ru
Rússia, Orlova Roscha, Gatchina, Leningrad oblast, 188300

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