Adaptive methods of solving inverse problems for improvement of fidelity of molecular DNA computations


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Abstract

Elaboration of methods of monitoring of biochemical reactions with DNA strands is necessary to solve one of the main problems in creation of biocomputers—improvement of fidelity of molecular DNA computations. In this paper, the results of solution of inverse two-parameter problems of laser Raman spectroscopy on determination of the types and concentration of DNA nitrogenous bases in multicomponent solutions are presented. Comparative analysis of the three used methods of solving these problems has demonstrated convincing advantages of artificial neural networks and of the method of projection to latent structures. Use of adaptive methods allowed achieving the accuracy of determining the concentration of each base in two-component solutions about 0.2–0.4 g/L.

About the authors

T. A. Dolenko

Skobeltsyn Institute of Nuclear Physics; Physics Department

Author for correspondence.
Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow; Moscow

S. A. Burikov

Skobeltsyn Institute of Nuclear Physics; Physics Department

Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow; Moscow

A. O. Efitorov

Skobeltsyn Institute of Nuclear Physics; Physics Department

Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow; Moscow

K. A. Laptinsky

Skobeltsyn Institute of Nuclear Physics; Physics Department

Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow; Moscow

O. E. Sarmanova

Physics Department

Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow

S. A. Dolenko

Skobeltsyn Institute of Nuclear Physics

Email: tdolenko@lid.phys.msu.ru
Russian Federation, Moscow

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