Characterization of the Russian beef cattle breed gene pools using inter simple sequence repeat DNA analysis (ISSR analysis)
- Авторы: Sulimova G.1, Voronkova V.2, Perchun A.1, Gorlov I.2,3, Randelin A.2, Slozhenkina M.2,3, Zlobina E.2
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Учреждения:
- Vavilov Institute of General Genetics
- Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production
- Volgograd State Technical University
- Выпуск: Том 52, № 9 (2016)
- Страницы: 963-968
- Раздел: Animal Genetics
- URL: https://journals.rcsi.science/1022-7954/article/view/187882
- DOI: https://doi.org/10.1134/S1022795416090143
- ID: 187882
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Аннотация
The gene pools of beef cattle breeds bred in Russia were characterized on the basis of inter simple sequence repeat DNA analysis (ISSR analysis). Samples of Aberdeen Angus, Kalmyk, and Kazakh Whitehead breeds from Russia, as well as of Hereford breed, hybrids of Kazakh Whitehead and Hereford breeds, and Kazakh Whitehead breed from the Republic of Kazakhstan, were examined. In the examined breeds, 27 AG-ISSR fragments were identified, 25 of which were polymorphic. The examined breeds were different both in the fragment profiles (the presence/absence of individual ISSR fragments) and in their frequencies. It was demonstrated that the hybrid animals lacked some ISSR fragments that were present with high frequencies in parental forms, suggesting considerable genome rearrangement in the hybrid animals (at the regions of microsatellite localization) in crossings of the individuals from different breeds. The level of genetic diversity in Russian beef breeds was consistent with the values typical of farmed populations (breeds). The genetic diversity parameters assessed by applying Nei’s gene diversity index and the Shannon index varied from 0.0218 to 0.0605 and from 0.0225 to 0.0819, respectively. The highest Shannon index value was detected in the Kalmyk breed (0.0837) and Kazakh Whitehead breed from Russia (0.0819), and the highest level of Nei’s gene diversity index was found in the Kalmyk breed (0.0562) and in both populations of the Kazakh Whitehead breed (0.0509 and 0.0605). The high level of genetic similarity (according to Nei) was revealed between Russian beef cattle breeds and Hereford cattle: 0.839 (for the Kazakh Whitehead breed from Russia) and 0.769 (for the Kalmyk breed).
Об авторах
G. Sulimova
Vavilov Institute of General Genetics
Автор, ответственный за переписку.
Email: galina_sulimova@mail.ru
Россия, Moscow, 119991
V. Voronkova
Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production
Email: galina_sulimova@mail.ru
Россия, Volgograd, 400131
A. Perchun
Vavilov Institute of General Genetics
Email: galina_sulimova@mail.ru
Россия, Moscow, 119991
I. Gorlov
Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production; Volgograd State Technical University
Email: galina_sulimova@mail.ru
Россия, Volgograd, 400131; Volgograd, 400005
A. Randelin
Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production
Email: galina_sulimova@mail.ru
Россия, Volgograd, 400131
M. Slozhenkina
Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production; Volgograd State Technical University
Email: galina_sulimova@mail.ru
Россия, Volgograd, 400131; Volgograd, 400005
E. Zlobina
Volga Region Research Institute of Manufacture and Processing of Meat-and-Milk Production
Email: galina_sulimova@mail.ru
Россия, Volgograd, 400131