Methods of high-throughput plant phenotyping for large-scale breeding and genetic experiments


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Abstract

Phenomics is a field of science at the junction of biology and informatics which solves the problems of rapid, accurate estimation of the plant phenotype; it was rapidly developed because of the need to analyze phenotypic characteristics in large scale genetic and breeding experiments in plants. It is based on using the methods of computer image analysis and integration of biological data. Owing to automation, new approaches make it possible to considerably accelerate the process of estimating the characteristics of a phenotype, to increase its accuracy, and to remove a subjectivism (inherent to humans). The main technologies of high-throughput plant phenotyping in both controlled and field conditions, their advantages and disadvantages, and also the prospects of their use for the efficient solution of problems of plant genetics and breeding are presented in the review.

About the authors

D. A. Afonnikov

Institute of Cytology and Genetics, Siberian Branch; Novosibirsk State University

Author for correspondence.
Email: ada@bionet.nsc.ru
Russian Federation, Novosibirsk, 630090; Novosibirsk, 630090

M. A. Genaev

Institute of Cytology and Genetics, Siberian Branch

Email: ada@bionet.nsc.ru
Russian Federation, Novosibirsk, 630090

A. V. Doroshkov

Institute of Cytology and Genetics, Siberian Branch

Email: ada@bionet.nsc.ru
Russian Federation, Novosibirsk, 630090

E. G. Komyshev

Institute of Cytology and Genetics, Siberian Branch

Email: ada@bionet.nsc.ru
Russian Federation, Novosibirsk, 630090

T. A. Pshenichnikova

Institute of Cytology and Genetics, Siberian Branch

Email: ada@bionet.nsc.ru
Russian Federation, Novosibirsk, 630090


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