The Effect of Shape and Concentration on Translational Diffusion of Proteins Measured by PFG NMR


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The concentration dependences of self-diffusion coefficient for irregular-shaped fibrinogen, for globular, spheroidal trypsin and α-chymotrypsin were studied by pulsed field gradient nuclear magnetic resonance. The experimental data were analyzed in a view of two known theoretical approaches—the hydrodynamic model of rigid spheres by Tokuyama and Oppenheim and the phenomenological approach based on the frictional formalism of non-equilibrium thermodynamics by Vink. The detailed discussion of their merits and drawbacks is presented. Our results testify that the Vink’s approach is quite universal, providing a satisfactory description of experimental data for proteins of complicated structure and different shape while the model of Tokuyama and Oppenheim is applicable only to proteins of more regular shape.

作者简介

A. Kusova

Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences; Kazan (Volga Region) Federal University

Email: yufzuev@mail.ru
俄罗斯联邦, Lobachevsky Str, 2/31, Kazan; Kremlevskaya Str., 18, Kazan, 420008

A. Sitnitsky

Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences

Email: yufzuev@mail.ru
俄罗斯联邦, Lobachevsky Str, 2/31, Kazan

B. Idiyatullin

Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences

Email: yufzuev@mail.ru
俄罗斯联邦, Lobachevsky Str, 2/31, Kazan

D. Bakirova

Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences

Email: yufzuev@mail.ru
俄罗斯联邦, Lobachevsky Str, 2/31, Kazan

Yu. Zuev

Kazan Institute of Biochemistry and Biophysics, Russian Academy of Sciences; Kazan (Volga Region) Federal University; Kazan State Power Engineering University

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Email: yufzuev@mail.ru
ORCID iD: 0000-0002-6715-2530
俄罗斯联邦, Lobachevsky Str, 2/31, Kazan; Kremlevskaya Str., 18, Kazan, 420008; Krasnoselskaya Str., 51, Kazan, 420066


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