Analysis of Element Composition of DNA-Protein Crystals In Vitro


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Abstract

The universal response of Escherichia coli to stress is enhancing the synthesis of specific histone-like Dps proteins that bind bacterial DNA. As a result, two-dimensional and three-dimensional crystalline arrays can be observed in the cytoplasm of starving bacteria. Conditions for obtaining in vitro co-crystals of DNA-Dps were selected, and their elemental composition was studied using analytical electron microscopy. It was found that Dps in the co-crystal retains its ferritin-like activity; that is, it can stimulate the oxidation of Fe2+ ions to Fe3+ and facilitate the accumulation of iron in the form of Fe2O3 in the inner cavity of the oligomer.

About the authors

A. V. Moiseenko

Department of Biology, Moscow State University

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

N. G. Loiko

Research Center of Biotechnology, Russian Academy of Sciences; Semenov Institute of Chemical Physics, Russian Academy of Sciences

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119071; Moscow, 117977

O. V. Chertkov

Department of Biology, Moscow State University

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

A. V. Feofanov

Department of Biology, Moscow State University; Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234; Moscow, 117997

Yu. F. Krupyanskii

Semenov Institute of Chemical Physics, Russian Academy of Sciences

Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 117977

O. S. Sokolova

Department of Biology, Moscow State University

Author for correspondence.
Email: sokolova@mail.bio.msu.ru
Russian Federation, Moscow, 119234

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