Informative Relevance of 11 Microsatellite Loci for Forensic DNA-Identification of Wild and Farm American Minc (Mustela vison) in Belarus
- Autores: Lukashkova V.1, Spivak A.1, Kotova S.1
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Afiliações:
- Scientific and Practical Center of the of the State Committee of Forensic Examinations of the Republic of Belarus
- Edição: Volume 59, Nº 4 (2023)
- Páginas: 460-473
- Seção: ГЕНЕТИКА ЖИВОТНЫХ
- URL: https://journals.rcsi.science/0016-6758/article/view/134580
- DOI: https://doi.org/10.31857/S0016675823040069
- EDN: https://elibrary.ru/AVXYCL
- ID: 134580
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Resumo
American mink is involved in economic activity of the Republic of Belarus since it belongs to resource hunting species as well as breeds for fur production. We propose identification test system consisting of 11 microsatellite DNA loci designed for forensic investigation of cases of illegal hunting and animals stealing for precious furs. Informative relevance of the test system studied using two samples of farm minks and a sample from a wild population of M. vision geographically isolated from fur farms. The significant genetic differences between wild and farmed minks (Fst = 0.04397, P < 0.05) showed with random match probabilities of 11-locus genotypes calculated with and without taking into account the Fst value differing by two orders (1.84 × 10–8 and 1.39 × 10–10 respectively). As concerned to forensic DNA analysis, the reference databases should be formed for wild and farm animals separately.
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Sobre autores
V. Lukashkova
Scientific and Practical Center of the of the State Committee of Forensic Examinationsof the Republic of Belarus
Autor responsável pela correspondência
Email: l22805@tut.by
Republic of Belarus, 220114, Minsk
A. Spivak
Scientific and Practical Center of the of the State Committee of Forensic Examinationsof the Republic of Belarus
Email: l22805@tut.by
Republic of Belarus, 220114, Minsk
S. Kotova
Scientific and Practical Center of the of the State Committee of Forensic Examinationsof the Republic of Belarus
Email: l22805@tut.by
Republic of Belarus, 220114, Minsk
Bibliografia
- Сидорович В.Е., Ставровский Д.Д. Норка американская // Звери: популярный энциклопедический справочник (животный мир Беларуси). Минск, 2003. С. 217–222.
- Министерство лесного хозяйства Республики Беларусь. Отчет о ведении охотничьего хозяйства за 2021 год. Минск, 2022. 6 с.
- Valnisty A.A., Homel K.V., Kheidorova E.E. et al. Molecular genetic polymorphism of American mink populations (Neovison vison) in model fur farms and on the adjacent territories in Belarus // Dokl. Natl Acad. Sci. Belarus. 2020. V. 64. № 6. P. 685–693. https://doi.org/10.29235/1561-8323-2020-64-6-685-693
- The Evaluation of Forensic DNA Evidence. Committee on DNA Forensic Science: an update. Washington (D.C.): Natl Acad. Press, 1996. 272 p.https://doi.org/10.17226/5141
- Fleming M.A., Ostrander E.A., Cook J.A. Microsatellite markers for American mink (Mustela vison) and ermine (Mustela erminea) // Mol. Ecol. 1999. V. 8. P. 1351–1362. https://doi.org/10.1046/j.1365-294x.1999.00701_2.x
- Vincent I.R., Farid A., Otieno C.J. Variability of thirteen microsatellite markers in American mink // Can. J. Anim. Sci. 2003. V. 83. P. 597–599. https://doi.org/10.4141/A03-001
- Dallas J.F., Piertney S.B. Microsatellite primers for the Eurasian otter // Mol. Ecol. 1998. V. 7. P. 1248–1250.
- Annavi G., Dawson D.A., Horsburgh G.J. et al. Characterization of twenty-one European badger (Meles meles) microsatellite loci facilitates the discrimination of second-order relatives // Conservation Genet. Resour. 2011. V. 3. P. 515–518. https://doi.org/10.1007/s12686-011-9392-9
- Rodrigues M., Santos-Reis M., Elmeros M. et al. Markers for genetic studies in the weasel (Mustela nivalis) // Eur. J. Wildl. Res. 2012. V. 58. P. 507–510. https://doi.org/10.1007/s10344-011-0583-1
- GeneAlEx 6.5: Genetic Analysis in Excel [Электронный ресурс]. URL: https://biology-assets.anu.edu.au/GenAlEx/Welcome.html (дата обращения 20.04.2022).
- Arlequin: An Integrated Software for Population Genetics Data Analysis [Электронный ресурс]. URL: http://cmpg.unibe.ch/software/arlequin3 (дата обращения 02.05.2022).
- Peakall R., Smouse P.E. GENEALEX 6: genetic analysis in Excel. Population genetic software for teaching and research // Mol. Ecol. 2006. V. 6. P. 288–295. https://doi.org/10.1093/bioinformatics/bts460
- Hutchinson W.F.D., Wills D., Shipley P. MICRO-CHECKER: Software for identifying and correcting genotyping errors in microsatellite data // Mol. Ecol. Notes. 2004. V. 4. № 3. P. 535–538. https://doi.org/10.1111/j.1471-8286.2004.00684.x
- Rice W.R. Analyzing tables of statistical tests // Evolution. 1989. V. 43. P. 223–225. https://doi.org/10.1111/j.1558-5646.1989.tb04220.x
- Kelly A.C., Mateus-Pinilla N.E., Douglas M. et al. Microsatellites behaving badly: empirical evaluation of genotyping errors and subsequent impacts on population studies // Genet. Mol. Research. 2011. V. 10. № 4. P. 2534–2553. https://doi.org/10.4238/2011.October.19.1
- Miller W.L., Edson J., Pietranrea P et al. Identification and evaluation of core microsatellite panel for use in white-tailed deer (Odocoileus virginianus) // BMC Genetics. 2019. V. 20. № 49. P. 1–14.
- Michalska-Parda A., Brzeziñski M., Zalewski A. et al. Genetic variability of feral and ranch American mink Neovison vison in Poland // Acta Theriologica. 2009. V. 54. P. 1–10. https://doi.org/10.1007/BF03193132
- Morris K.Y., Bowman J., Schulte-Hostedde A. et al. Functional genetic diversity of domestic and wild American mink (Neovison vison) // Evol. Appl. 2020. V. 13. P. 2610–2629. https://doi.org/10.1111/eva.13061
- Morf N.V., Kopps A.M., Nater A. et al. STRoe deer: A validated forensic STR profiling system for the European roe deer (Capreolus capreolus) // Forensic Sci. Intern.: Animals and Environments. 2021. V. 1. P. 1–10. https://doi.org/10.1016/j.fsiae.2021.100023
- Jobin R.M., Patterson D., Zhang Y. DNA typing in populations of mule deer for forensic use in the Province of Alberta // Forensic Sci. Intern.: Genetics. 2008. V. 2. P. 190–197. https://doi.org/10.1016/j.fsigen.2008.01.003
- Hamlin B.C., Erin P., Meredith E.P. et al. OdoPlex: An STR multiplex panel optimized and validated for forensic identification and sex determination of North American mule deer (Odocoileus hemionus) and white-tailed deer (Odocoileus virginianus) // Forensic Sci. Intern.: Animals and Environments. 2021. V. 1. P. 11–21. https://doi.org/10.1016/j.fsiae.2021.100026
- Szabolcsi Z., Egyed B., Zenke P. et al. Constructing STR multiplexes for individual identification of Hungarian red deer // J. Forensic Sci. 2014. V. 59. № 4. P. 1090–1099. https://doi.org/10.1111/1556-4029.12403
- Rębała K., Nedzvetskaya D.E., Kotova S.A. Forensic STR typing of European elk (moose) and European roe deer reveals contrasting patterns of genetic structure of the two cervids in Belarus // Russ. J. Genet. 2022. in press.
- Rębala K., Rabtsava A.A., Kotova S.A. et al. STR profiling for discrimination between wild and domestic swine specimens and between main breeds of domestic pigs reared in Belarus // PLoS One. 2016. V. 11. № 11. P. 1–14. https://doi.org/10.1371/journal.pone.0166563
- SWGDAM, Scientific Working Group on DNA Analysis Methods, Recommendations of the SWGDAM Ad Hoc Working Group on Genotyping Results Reported as Likelihood Ratios, SWGDAM, 2018. P. 1–6. https://doi.org/1ecb9588-ea6f-4feb
- Ogden R., Linacre A. Wildlife forensic science: A review of genetic geographic origin assignment // Forensic Sci. Intern. Genet. 2015. V. 18. P. 152–159. https://doi.org/10.1016/j.fsigen.2015.02.008