Analysis of Genome Variability of Escherichia coli when Exposed to Ionizing Radiation

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Abstract

The study of changes in the genetic apparatus of biological systems due to the influence of physical factors contributes to understanding the mechanisms of adaptation. The article is devoted to the analysis of the genome of the modified Escherichia coli PL-6 variant obtained as a result of repeated and gradually increasing exposure to 60Co ɤ-rays at the Researcher facility. The integrity of the genetic material of the studied bacterial cells was checked by electrophoresis in 1.7% agarose gel. For the analysis of genome modifications, primers were designed to amplify several loci characterized by homology in a variety of E. coli strains. Based on the indicators of the number and size of amplified products using each of the presented primer combinations in E. coli before and after gamma irradiation, a significant change in the genome was established.

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About the authors

M. Yu. Gallyamova

Federal Center for Toxicological, Radiation and Biological Safety

Author for correspondence.
Email: kostya9938@yandex.ru
Russian Federation, Kazan

K. N. Vagin

Federal Center for Toxicological, Radiation and Biological Safety; Kazan (Volga Region) Federal University

Email: kostya9938@yandex.ru
Russian Federation, Kazan; Kazan

N. M. Vasilevsky

Federal Center for Toxicological, Radiation and Biological Safety

Email: kostya9938@yandex.ru
Russian Federation, Kazan

N. I. Hammadov

Federal Center for Toxicological, Radiation and Biological Safety

Email: kostya9938@yandex.ru
Russian Federation, Kazan

References

Supplementary files

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1. JATS XML
2. Fig. 1. Electropherogram of amplification products of the 1pO26-Vir, 1pVM01, 1p417H-90, 1pNDM102337, 1pChi7122-2 and 3pO26-Vir loci. M – DNA molecular weight marker “M16” (Sibenzym, Russia); 1, 2 – 1pO26-Vir locus; 3, 4 – locus 1pVM01; 5, 6 – locus 1p417H-90; 7, 8 – locus 1pNDM102337; 9, 10 – locus 1pChi7122-2, 11, 12 – locus 3pO26-Vir; control samples – 1, 3, 5, 7, 9 and 11; irradiated samples – 2, 4, 6, 8, 10 and 12.

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3. Fig. 2. Electropherogram of amplification products of loci 2pNDM102337, 1pChi7122-3, 4pO26-Vir, 1pO86A1, 4pVM01. M – DNA molecular weight marker “M16” (Sibenzym, Russia); 1, 2 – locus 2pNDM102337; 3, 4 – locus 1pChi7122-3; 5, 6 – 4pO26-Vir locus; 7, 8 – locus 1pO86A1; 9, 10 – locus 4pVM01; control samples – 1, 3, 5, 7 and 9; irradiated samples – 2, 4, 6, 8 and 10.

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