Prediction of F1 progeny variation in tomato (Solanum Lycopersicum L.) from parental divergence assessed by SSR markers
- Authors: Shapturenko M.N.1, Tarutina L.A.1, Mishin L.A.2, Kubrak S.V.1, Kilchevskiy A.V.1, Khotyleva L.V.1
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Affiliations:
- Institute of Genetics & Cytology National Academy of Sciences
- Institute of Vegetable Crops
- Issue: Vol 12, No 3 (2014)
- Pages: 3-11
- Section: Articles
- URL: https://journals.rcsi.science/ecolgenet/article/view/2421
- DOI: https://doi.org/10.17816/ecogen1233-11
- ID: 2421
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##article.viewOnOriginalSite##About the authors
Marina Nikolayevna Shapturenko
Institute of Genetics & Cytology National Academy of Sciences
Email: Shapturenko@igc.bas-net.by
Leading Researcher, PhD. Laboratory of Ecological Genetics and Biotechnology
Lyudmila Aleksandrovna Tarutina
Institute of Genetics & Cytology National Academy of Sciences
Email: L.Tarutina@igc.bas-net.by
Leading Researcher, PhD. Laboratory of Ecological Genetics and Biotechnology
Leonid Aleksandrovich Mishin
Institute of Vegetable Crops
Email: Leo123@tut.by
ead of the Laboratory solanaceous crops, PhD
Svetlana Vladmimrovna Kubrak
Institute of Genetics & Cytology National Academy of Sciences
Email: S.Kubrak@igc.bas-net.by
Junior Researcher. Laboratory of Ecological Genetics and Biotechnology
Aleksandr Vladimirovich Kilchevskiy
Institute of Genetics & Cytology National Academy of Sciences
Email: A.Kilchevcky@igc.bas-net.by
Head of the Laboratory, Dr.Sci., Prof. Laboratory of Ecological Genetics and Biotechnology
Lyubov Vladimirovna Khotyleva
Institute of Genetics & Cytology National Academy of Sciences
Email: L.Khotyleva@igc.bas-net.by
Chief Scientist, Dr.Sci., Prof., Academician. Laboratory of Ecological Genetics and Biotechnology
References
- Мазер К., Джинкс Дж. (1985) Гетерозис. В кн. Биометрическая генетика. Москва: Мир. С. 156-163.
- Турбин Н. В. (1961) Гетерозис и генетический баланс. В кн. Гетерозис. Теория и методы практического использования. Минск: изд-во АН БССР. С. 3-34.
- Burgueño J., Campos G., Weigel K., Crossa J. (2012) Genomic prediction of breeding values when modeling genotype × environment interaction using pedigree and dense molecular markers. Crop Sci. V. 52: P. 707-719.
- Cho Y. I., Park Ch. W., Kwon S. W. et al. (2004) Key DNA markers for predicting heterosis in F1 hybrids of japonica rice. Breeding Sci. V. 54. P. 389-397.
- Comstock R. E., Robinson H. F. (1948) The components of genetic variance in population of biparental progenies and their use in estimating the average degree of dominance. Biometrics, V. 4(3): P. 254-266.
- Cox T., Kiang Y., Gorman M., Rodgers D. (1984) Relationship between coefficient of parentage and genetic similarity indices in the soybean. Crop Sci. V. 25 (3): P. 529-532.
- Crossa J., Campos G., Pérez P. et al. (2010) Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers. Genetics. V. 186(2): P. 713-724.
- Davenport С. B. (1908) Degeneration, albinism and inbreeding. Science. V. 28 (718): P. 454-455.
- East E. M., Hayes H. K. (1912) Heterozygosis in evolution and in plant breeding. U. S. Dept. Agr., Bur. Plant. Indus. Bull. 243. 58 p.
- Frisch M., Thiemann A., Fu J. et al. (2010) Transcriptome-based distance measures for grouping of germplasm and prediction of hybrid performance in maize. Theor Appl Genet. V. 120(2): P. 441-450.
- Gärtner T., Steinfath M., Andorf S., Lisec J., Meyer Rh. C., Altmann T., Willmitzer L., Selbig J. (2009) Improved Heterosis Prediction by Combining Information on DNA- and Metabolic Markers. PLoS ONE. V. 4(4): e5220.
- Geethanjali S., Kadirvel P., Pana R. et al. (2011) Development of tomato SSR markers from anchored BAC clones of chromosome 12 and their application for genetic diversity analysis and linkage mapping. Euphytica V. 178(2): P. 283-295.
- Geethanjali S., Wang J. F., Chen K. Y., Pastrana D. V. (2010) Development and characterization of tomato SSR markers from genomic sequences of anchored BAC clones on chromosome VI. Euphytica. V. 173(1): P. 85-97.
- Goff S. A., Zhang Q. (2013) Heterosis in elite hybrid rice: speculation on the genetic and biochemical mechanisms. Current Opinion in Plant Biology. V. 16(2): P. 221-227.
- Goodnigh C. J. (1999) Epistasis and heterosis. In: James Coors and Shivaji Pandey, editors. The Genetics and Exploitation of Heterosis in Crops. Am. Soc. of Agronomy/Crop. Sci. Soc. of Am. Madison, WI.: P. 59-68.
- Gupta P. K., Varshney R. K. (2000) The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica. V. 113(3): P. 163-185.
- Jones D. T. (1917) Dominance of linked factors as a means of accounting for heterosis. Proc. Natl. Acad. Sci. USA. V. 3(4): P. 310-312.
- Kabelka E., Yang W., Francis D. M. (2004) Improved tomato fruit color within an inbred backcross line derived from Lycopersocon esculentum and L. hirsutum involves the interaction of loci. J. Amer. Soc. Hort. Sci. V. 129 (2): P. 250-257.
- Lee E. A., Ash M. J., Good B. (2007) Re-examining the relationship between degree of relatedness, genetic effects, and heterosis in maize. Crop Sci. V. 47(2): P. 629-635.
- Mazzucato A., Papa R., Bitocchi E. et al. (2008) Genetic diversity, structure and marker-trait associations in a collection of Italian tomato (Solanum lycopersicon L.) landraces. Theor Appl Genet. V. 116(5): P. 657-669.
- Nei M., Li M. H. (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. V. 76: P. 5269-5273.
- Riedelsheimer C., Czedik-Eysenberg A., Grieder C. et al. (2012) Genomic and metabolic prediction of complex heterotic traits in hybrid maize. Nat Genet. V. 44(2): P. 217-220.
- Ruiz J. J., Garcia-Martinez S., Pico B. et al. (2005) Genetic variability and relationship of closely related Spanish traditional cultivars of tomato as detected by SRAP and SSR markers. J Amer Soc Hort Sci. V. 130(1): P. 88-94.
- Saatchi M., McClure M. C., McKay S. D. et al. (2011) Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation. Genetics Selection Evolution. V. 43: 40. URL: http://www.gsejournal.org/content/43/1/40 (doi: 10.1186/1297-9686-43-40).
- Semel Y., Nissenbaum J., Menda N. et al. (2006) Overdominant quantitative trait loci for yield and fitness in tomato. Proc. Natl. Acad. Sci. USA. V. 103(35): P. 12981-12986.
- Schrag T. A., Möhring J., Melchinger A. E. et al. (2010) Prediction of hybrid performance in maize using molecular markers and joint analyses of hybrids and parental inbreds. Theor Appl Genet. V. 120(2): P. 451-461.
- Stuber C. W. (1994) Heterosis in plant breeding. Plant Breed. Rev. V. 12: P. 227-251.
- Shull G. H. (1911) The genotypes of maize. Amer Naturalist. V. 45(2): P. 232-252.
- Varshney R. K., Graner A., Sorrells M. E. (2005) Genic microsatellite markers in plants: features and applications. Trends in Biotechnology. V. 23(1): P. 48-55.