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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="research-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Siberian Journal of Life Sciences and Agriculture</journal-id><journal-title-group><journal-title xml:lang="en">Siberian Journal of Life Sciences and Agriculture</journal-title><trans-title-group xml:lang="ru"><trans-title>Siberian Journal of Life Sciences and Agriculture</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2658-6649</issn><issn publication-format="electronic">2658-6657</issn><publisher><publisher-name xml:lang="en">Science and Innovation Center Publishing House</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">369579</article-id><article-id pub-id-type="doi">10.12731/2658-6649-2025-17-6-2-1546</article-id><article-id pub-id-type="edn">OXIRFN</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>Articles</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>Статьи</subject></subj-group><subj-group subj-group-type="article-type"><subject>Research Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Bacteriocins for agriculture and aquaculture</article-title><trans-title-group xml:lang="ru"><trans-title>Бактериоцины для сельского хозяйства и аквакультуры</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-3497-3102</contrib-id><name-alternatives><name xml:lang="en"><surname>Meskhi</surname><given-names>Besarion Ch.</given-names></name><name xml:lang="ru"><surname>Месхи</surname><given-names>Бесарион Чохоевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Doctor of Technical Sciences, Professor, Rector, Academician of the Russian Academy of Sciences</p> <p> </p></bio><bio xml:lang="ru"><p>д-р техн. наук, профессор, ректор, академик Российской академии образования</p> <p> </p></bio><email>reception@donstu.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-1916-8570</contrib-id><contrib-id contrib-id-type="scopus">57212389828</contrib-id><name-alternatives><name xml:lang="en"><surname>Rudoy</surname><given-names>Dmitry V.</given-names></name><name xml:lang="ru"><surname>Рудой</surname><given-names>Дмитрий Владимирович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Doctor of Engineering Sciences, Head of the Specialized organization of the territorial cluster “Dolina Dona” of the Rostov region, Dean of the Faculty “Agribusiness”, Chief Researcher of the Research laboratory “Agrobiotechnology Center”, Associate Professor of the Department “Technologies and Equipment for Processing Agricultural Products”</p> <p> </p></bio><bio xml:lang="ru"><p>д-р техн. наук, руководитель специализированной организации территориального кластера «Долина Дона» Ростовской области, декан факультета «Агропромышленный», главный научный сотрудник научно-исследовательской лаборатории «Центр агробиотехнологии», доцент кафедры «Технологии и оборудование переработки продукции агропромышленного комплекса»</p> <p> </p></bio><email>dmitriyrudoi@gmail.com</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-8318-3938</contrib-id><contrib-id contrib-id-type="scopus">57204675629</contrib-id><name-alternatives><name xml:lang="en"><surname>Olshevskaya</surname><given-names>Anastasiya V.</given-names></name><name xml:lang="ru"><surname>Ольшевская</surname><given-names>Анастасия Владимировна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Candidate of Technical Sciences, Deputy Head of the Development center of the territorial cluster “Dolina Dona”, Deputy Dean for Strategic and Digital Development of the Faculty “Agribusiness”, Associate Professor of the Department “Technologies and Equipment for Processing Agricultural Products”</p>
<p> </p></bio><bio xml:lang="ru"><p>канд. техн. наук, заместитель декана по стратегическому и цифровому развитию факультета «Агропромышленный», заместитель руководителя Центра развития территориального кластера «Долина Дона», доцент кафедры «Технологии и оборудование переработки продукции агропромышленного комплекса»</p>
<p> </p></bio><email>olshevskaya.av@gs.donstu.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-1202-6622</contrib-id><contrib-id contrib-id-type="researcherid">E-9058-2019</contrib-id><contrib-id contrib-id-type="spin">1871-6987</contrib-id><name-alternatives><name xml:lang="en"><surname>Kozyrev</surname><given-names>Denis A.</given-names></name><name xml:lang="ru"><surname>Козырев</surname><given-names>Денис Андреевич</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Candidate of Biological Sciences</p> <p> </p></bio><bio xml:lang="ru"><p>кандидат биологических наук</p> <p> </p></bio><email>dinis.kozyrev@bk.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-5001-4959</contrib-id><contrib-id contrib-id-type="scopus">1031771</contrib-id><name-alternatives><name xml:lang="en"><surname>Shevchenko</surname><given-names>Victoria N.</given-names></name><name xml:lang="ru"><surname>Шевченко</surname><given-names>Виктория Николаевна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Candidate of Biological Sciences, Deputy Dean of the Faculty “Agribusiness”, Senior Researcher of the Research Laboratory “Agrobiotechnology Center”</p>
<p> </p></bio><bio xml:lang="ru"><p>канд. биол. наук, заместитель декана факультета «Агропромышленный», старший научный сотрудник научно-исследовательской лаборатории «Центр агробиотехнологии»</p>
<p> </p></bio><email>vikakhorosheltseva@gmail.com</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-3371-0098</contrib-id><contrib-id contrib-id-type="scopus">58078886200</contrib-id><contrib-id contrib-id-type="spin">5866-4856</contrib-id><name-alternatives><name xml:lang="en"><surname>Odabashyan</surname><given-names>Mary Yu.</given-names></name><name xml:lang="ru"><surname>Одабашян</surname><given-names>Мэри Юрьевна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Candidate of Biological Sciences, Deputy Dean of the Faculty “Agribusiness”, Senior Researcher of the Center for Agrobioengineering of Essential Oil and Medicinal Plants, Associate Professor of the Department “Technologies and Equipment for Processing Agricultural Products”</p> <p> </p></bio><bio xml:lang="ru"><p>канд. биол. наук, заместитель декана факультета «Агропромышленный», старший научный сотрудник Центра агробиоинженерии эфиромасличных и лекарственных растений, доцент кафедры «Технологии и оборудование переработки продукции агропромышленного комплекса»</p> <p> </p></bio><email>modabashyan@donstu.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-4245-1523</contrib-id><contrib-id contrib-id-type="scopus">57214222442</contrib-id><contrib-id contrib-id-type="spin">5088-2149</contrib-id><name-alternatives><name xml:lang="en"><surname>Teplyakova</surname><given-names>Svetlana V.</given-names></name><name xml:lang="ru"><surname>Теплякова</surname><given-names>Светлана Викторовна</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Candidate of Technical Sciences, Deputy Dean of the Faculty “Agribusiness”, Associate Professor of the Department “Technologies and Equipment for Processing Agricultural Products”, Senior Researcher of the Development Center of the Territorial Cluster “Dolina Dona”</p> <p> </p></bio><bio xml:lang="ru"><p>канд. техн. наук, заместитель декана факультета «Агропромышленный», доцент кафедры «Технологии и оборудование переработки продукции агропромышленного комплекса», старший научный сотрудник Центра развития территориального кластера «Долина Дона»</p> <p> </p></bio><email>teplyakova.sv@gs.donstu.ru</email><xref ref-type="aff" rid="aff1"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="spin">9606-8971</contrib-id><name-alternatives><name xml:lang="en"><surname>Dzhedirov</surname><given-names>Dmitry A.</given-names></name><name xml:lang="ru"><surname>Джедиров</surname><given-names>Дмитрий Александрович</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Acting Vice-Rector for General Affairs</p> <p> </p></bio><bio xml:lang="ru"><p>и.о. проректора по общим вопросам</p> <p> </p></bio><email>ddjedirov@donstu.ru</email><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Don State Technical University</institution></aff><aff><institution xml:lang="ru">Федеральное государственное бюджетное образовательное учреждение высшего образования «Донской государственный технический университет»</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2025-12-30" publication-format="electronic"><day>30</day><month>12</month><year>2025</year></pub-date><volume>17</volume><issue>6-2</issue><issue-title xml:lang="ru"/><fpage>225</fpage><lpage>256</lpage><history><date date-type="received" iso-8601-date="2026-01-20"><day>20</day><month>01</month><year>2026</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2025, Meskhi B.C., Rudoy D.V., Olshevskaya A.V., Kozyrev D.A., Shevchenko V.N., Odabashyan M.Y., Teplyakova S.V., Dzhedirov D.A.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2025, Месхи Б.Ч., Рудой Д.В., Ольшевская А.В., Козырев Д.А., Шевченко В.Н., Одабашян М.Ю., Теплякова С.В., Джедиров Д.А.</copyright-statement><copyright-year>2025</copyright-year><copyright-holder xml:lang="en">Meskhi B.C., Rudoy D.V., Olshevskaya A.V., Kozyrev D.A., Shevchenko V.N., Odabashyan M.Y., Teplyakova S.V., Dzhedirov D.A.</copyright-holder><copyright-holder xml:lang="ru">Месхи Б.Ч., Рудой Д.В., Ольшевская А.В., Козырев Д.А., Шевченко В.Н., Одабашян М.Ю., Теплякова С.В., Джедиров Д.А.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by-nc-nd/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://journals.rcsi.science/2658-6649/article/view/369579">https://journals.rcsi.science/2658-6649/article/view/369579</self-uri><abstract xml:lang="en"><p>Background. The aggravation of the problem of antimicrobial resistance caused by the irrational use of antibiotics in agriculture and aquaculture necessitates the search for sustainable and safe alternatives. Bacteriocins are ribosomally synthesized antimicrobial peptides of bacterial origin. A class of natural compounds for combating resistant pathogens with minimal environmental impact. This review explores the complex potential of using bacteriocins as an alternative to antibiotics. A detailed analysis of the structural diversity, classification approaches, and established mechanisms of antimicrobial action was carried out, including disruption of cell membrane integrity, inhibition of cell wall synthesis, and inhibition of nucleic acid and protein production. Key bacteriocin-producing genera (Bacillus, Streptomyces, and Pseudomonas) and their biologically active metabolites have been identified. The analysis of bacteriocins’ use in agriculture, in particular their role as agents of biocontrol of phytopathogens, plant growth promoters, as well as means of improving the health and productivity of farm animals and birds. Their potential in aquaculture for disease control (directed against pathogens such as Vibrio spp., Aeromonas spp., Yersinia ruckeri), water quality improvement, and feed conservation is considered, which helps reduce dependence on the preventive use of antibiotics. Despite significant achievements, challenges remain related to in vivo efficacy assessment, development of delivery systems, the possibility of resistance development, and regulatory aspects. Addressing these issues is a key condition for realizing the potential of bacteriocins as environmentally sound tools for ensuring food security and sustainable development of terrestrial and aquaculture systems.</p> <p>Purpose. The aim of this review is to comprehensively analyze the potential of bacteriocins as a sustainable alternative to antibiotics in agriculture and aquaculture. This involves summarizing current knowledge on their structural diversity, classification, mechanisms of antimicrobial action, key producer genera, and practical applications in crop production, livestock farming, and aquaculture disease management.</p> <p>Materials and methods. This study is a descriptive review. The material for the analysis was composed of contemporary scientific literature sourced from databases such as PubMed, Scopus, and Google Scholar. The methodology included a systematic search, selection, and critical analysis of publications focusing on bacteriocin production, classification, mechanisms of action, and their applications in terrestrial and aquatic agricultural systems. The review synthesizes data from in vitro and in vivo studies to present a holistic overview of the field.</p> <p>Results. The analysis reveals the significant structural and functional diversity of bacteriocins, which can be classified into several classes (e.g., lantibiotics, unmodified peptides) based on genetic and structural criteria. Their antimicrobial mechanisms are multifaceted, primarily involving pore formation in target cell membranes, inhibition of cell wall synthesis (e.g., via lipid II binding), and disruption of nucleic acid and protein synthesis. Key soil-derived genera, including Bacillus, Streptomyces, and Pseudomonas, are prolific producers of diverse bacteriocins with activity against major plant, animal, and aquatic pathogens (e.g., Listeria, MRSA, Aeromonas, and Vibrio). In agriculture, bacteriocins demonstrate potential as biocontrol agents against phytopathogens and as plant growth promoters. In aquaculture, their applications span disease control, water quality improvement, feed preservation, and use as probiotic supplements, contributing to enhanced animal health and reduced reliance on prophylactic antibiotics.</p> <p>Conclusion. Bacteriocins emerge as a highly promising and environmentally sound tool for enhancing the sustainability and productivity of both terrestrial and aquatic agricultural systems. Their targeted activity against key pathogens, role in biocontrol and growth stimulation, and ability to preserve product quality with minimal impact on beneficial microbiota underscore their potential. However, translating this potential into practical, scalable solutions necessitates addressing several challenges. Future efforts must focus on robust in vivo efficacy testing, the development of effective delivery systems, understanding the risks of resistance development, and navigating the regulatory landscape. Interdisciplinary research is crucial to bridge the gap between laboratory findings and field application.</p></abstract><trans-abstract xml:lang="ru"><p>Обоснование. Обострение проблемы антимикробной резистентности, вызванной нерациональным использованием антибиотиков в сельском хозяйстве и аквакультуре, обуславливает необходимость поиска устойчивых и безопасных альтернатив. Бактериоцины представляют собой рибосомно синтезируемые антимикробные пептиды бактериального происхождения – класс природных соединений для борьбы с резистентными патогенами, обладающий минимальным воздействием на окружающую среду. В данном обзоре исследуется комплексный потенциал применения бактериоцинов в качестве альтернативы антибиотикам. Проведен детальный анализ структурного разнообразия, подходов к классификации и установленных механизмов антимикробного действия, включая нарушение целостности клеточной мембраны, ингибирование синтеза клеточной стенки, а также подавление синтеза нуклеиновых кислот и белков. Определены ключевые продуцирующие бактериоцины роды (Bacillus, Streptomyces и Pseudomonas) и их биологически активные метаболиты. Проанализировано применение бактериоцинов в сельском хозяйстве, в частности их роль в качестве агентов биоконтроля фитопатогенов, стимуляторов роста растений, а также средств улучшения здоровья и продуктивности сельскохозяйственных животных и птиц. Рассмотрен их потенциал в аквакультуре для контроля заболеваний (направленных против таких патогенов, как Vibrio spp., Aeromonas spp., Yersinia ruckeri), улучшения качества воды и консервации кормов, что способствует сокращению зависимости от превентивного использования антибиотиков. Несмотря на значительные достижения, сохраняются проблемы, связанные с оценкой эффективности in vivo, разработкой систем доставки, возможностью развития резистентности и регуляторными аспектами. Решение этих вопросов является ключевым условием для реализации потенциала бактериоцинов в качестве экологически безопасных инструментов обеспечения продовольственной безопасности и устойчивого развития наземных и аквакультурных систем.</p> <p>Цель. Провести комплексный анализ потенциала применения бактериоцинов в качестве альтернативы антибиотикам в сельском хозяйстве и аквакультуре, обобщив данные об их классификации, механизмах действия, основных продуцентах и направлениях использования.</p> <p>Материалы и методы. Проведен обзор и анализ современных научных литературных источников, посвященных бактериоцинам, их продуцентам (включая роды Bacillus, Streptomyces, Pseudomonas), механизмам антимикробного действия и практическому применению в агросекторе и аквакультуре.</p> <p>Результаты. Систематизированы данные о структурном разнообразии и классификации бактериоцинов. Подробно описаны установленные механизмы их антимикробного действия, включая нарушение целостности клеточной мембраны, ингибирование синтеза клеточной стенки, нуклеиновых кислот и белков. Выявлены ключевые роды бактерий-продуцентов и охарактеризованы их биологически активные метаболиты. Проанализированы возможности применения бактериоцинов в растениеводстве в качестве агентов биоконтроля фитопатогенов и стимуляторов роста растений, а также в животноводстве и птицеводстве для улучшения здоровья и продуктивности. Рассмотрен потенциал бактериоцинов в аквакультуре для контроля заболеваний (включая патогены Vibrio spp., Aeromonas spp., Yersinia ruckeri), улучшения качества воды и консервации кормов.</p> <p>Заключение. Бактериоцины представляют собой экологичную альтернативу традиционным антибиотикам для повышения продуктивности и устойчивости агро- и аквасистем. Реализация их потенциала требует решения задач, связанных с оценкой эффективности in vivo, разработкой систем доставки, изучением рисков развития резистентности и преодолением регуляторных барьеров.</p></trans-abstract><kwd-group xml:lang="en"><kwd>bacteriocins</kwd><kwd>sustainable agriculture</kwd><kwd>aquaculture disease management</kwd><kwd>fish pathogens</kwd><kwd>probiotics</kwd><kwd>soil bacteria</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>бактериоцины</kwd><kwd>устойчивое сельское хозяйство</kwd><kwd>контроль заболеваний в аквакультуре</kwd><kwd>рыбные патогены</kwd><kwd>пробиотики</kwd><kwd>почвенные бактерии</kwd></kwd-group><funding-group/></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Abdelhamed, H., Lawrence, M. L., &amp; Karsi, A. (2018). Development and characterization of a novel live attenuated vaccine against enteric septicemia of catfish. 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