Reconstruction of SNP haplotypes with mutation c.-23+1G>A in human gene GJB2 (Chromosome 13) in some populations of Eurasia


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Аннотация

The c.-23+1G>A splice site mutation is one of the most frequent mutations of gene GJB2 (Cx26, 13q11-q12) associated with congenital non-syndromic autosomal recessive deafness. This mutation is characterized by a wide spread from Eastern Siberia and Central Asia to Eastern Europe, the Middle East, and South Asia. It is currently unknown whether this mutation spread over such a vast territory as a result of the founder effect or there were several local centers of origin of this mutation. For the first time, on the basis of the analysis of variability of nine SNP markers, five different haplotypes in deaf patients homozygous for mutation c.-23+1G>A from six Eurasian populations were reconstructed. The structure of the haplotypes revealed in Yakuts, Russians, Evenks, Tuvinians, Mongols, and Turks makes it possible to assume that mutation c.-23+1G>A (GJB2) could have spread across Eurasia as a result of the founder effect. The greatest diversity of haplotypes with c.-23+1G>A was found in patients from Mongolia, which probably refers to the earlier period of expansion of haplotypes carrying this mutation on the territory of Central Asia.

Негізгі сөздер

Авторлар туралы

A. Solovyev

Ammosov North-Eastern Federal University; Yakut Scientific Center of Complex Medical Problems

Хат алмасуға жауапты Автор.
Email: nelloann@mail.ru
Ресей, Yakutsk, 677000; Yakutsk, 677010

N. Barashkov

Ammosov North-Eastern Federal University; Yakut Scientific Center of Complex Medical Problems

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000; Yakutsk, 677010

M. Bady-Khoo

Perinatal Center of the Tuva Republic

Email: nelloann@mail.ru
Ресей, Kyzyl, 667003

M. Zytsar

Federal Research Center Institute of Cytology and Genetics, Siberian Branch; Novosibirsk State University

Email: nelloann@mail.ru
Ресей, Novosibirsk, 630090; Novosibirsk, 630090

O. Posukh

Federal Research Center Institute of Cytology and Genetics, Siberian Branch; Novosibirsk State University

Email: nelloann@mail.ru
Ресей, Novosibirsk, 630090; Novosibirsk, 630090

G. Romanov

Ammosov North-Eastern Federal University; Yakut Scientific Center of Complex Medical Problems

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000; Yakutsk, 677010

A. Rafailov

Ammosov North-Eastern Federal University

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000

N. Sazonov

Ammosov North-Eastern Federal University

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000

A. Alexeev

Institute of Humanitarian Research and Indigenous Peoples of the North, Siberian Branch

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000

L. Dzhemileva

Institute of Biochemistry and Genetics, Ufa Scientific Centre; Bashkir State Medical University

Email: nelloann@mail.ru
Ресей, Ufa, 450054; Ufa, 450000

E. Khusnutdinova

Institute of Biochemistry and Genetics, Ufa Scientific Centre; Bashkir State University

Email: nelloann@mail.ru
Ресей, Ufa, 450054; Ufa, 450000

S. Fedorova

Ammosov North-Eastern Federal University; Yakut Scientific Center of Complex Medical Problems

Email: nelloann@mail.ru
Ресей, Yakutsk, 677000; Yakutsk, 677010


© Pleiades Publishing, Inc., 2017

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