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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="review-article" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Advances in Chemical Physics</journal-id><journal-title-group><journal-title xml:lang="en">Advances in Chemical Physics</journal-title><trans-title-group xml:lang="ru"><trans-title>Физиология растений</trans-title></trans-title-group></journal-title-group><issn publication-format="print">0015-3303</issn><issn publication-format="electronic">3034-624X</issn><publisher><publisher-name xml:lang="en">The Russian Academy of Sciences</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">261881</article-id><article-id pub-id-type="doi">10.31857/S0015330324020024</article-id><article-id pub-id-type="edn">OBXANC</article-id><article-categories><subj-group subj-group-type="toc-heading"><subject>ОБЗОРЫ</subject></subj-group><subj-group subj-group-type="article-type"><subject>Review Article</subject></subj-group></article-categories><title-group><article-title xml:lang="en">Генетические механизмы регуляции обновления клеток корневого чехлика у <italic>Arabidopsis thaliana</italic> L.</article-title><trans-title-group xml:lang="ru"><trans-title>Генетические механизмы регуляции обновления клеток корневого чехлика у <italic>Arabidopsis thaliana</italic> L.</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><name><surname>Черенко</surname><given-names>В. А.</given-names></name><address><country country="RU">Russian Federation</country></address><email>ezemlyanskaya@bionet.nsc.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff4"/></contrib><contrib contrib-type="author"><name><surname>Омельянчук</surname><given-names>Н. А.</given-names></name><address><country country="RU">Russian Federation</country></address><email>ezemlyanskaya@bionet.nsc.ru</email><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><name><surname>Землянская</surname><given-names>Е. В.</given-names></name><address><country country="RU">Russian Federation</country></address><email>ezemlyanskaya@bionet.nsc.ru</email><xref ref-type="aff" rid="aff3"/><xref ref-type="aff" rid="aff4"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en"></institution></aff><aff><institution xml:lang="ru">Федеральное государственное бюджетное научное учреждение “Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук”</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="ru">Федеральное государственное автономное образовательное учреждение высшего образования “Новосибирский национальный исследовательский государственный университет”</institution></aff><aff><institution xml:lang="en"></institution></aff></aff-alternatives><aff id="aff3"><institution>Федеральное государственное бюджетное научное учреждение “Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук”</institution></aff><aff id="aff4"><institution>Федеральное государственное автономное образовательное учреждение высшего образования “Новосибирский национальный исследовательский государственный университет”</institution></aff><pub-date date-type="pub" iso-8601-date="2024-03-15" publication-format="electronic"><day>15</day><month>03</month><year>2024</year></pub-date><volume>71</volume><issue>2</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>135</fpage><lpage>148</lpage><history><date date-type="received" iso-8601-date="2024-08-16"><day>16</day><month>08</month><year>2024</year></date><date date-type="accepted" iso-8601-date="2024-08-16"><day>16</day><month>08</month><year>2024</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2024, Russian Academy of Sciences</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2024, Российская академия наук</copyright-statement><copyright-year>2024</copyright-year><copyright-holder xml:lang="en">Russian Academy of Sciences</copyright-holder><copyright-holder xml:lang="ru">Российская академия наук</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/></permissions><self-uri xlink:href="https://journals.rcsi.science/0015-3303/article/view/261881">https://journals.rcsi.science/0015-3303/article/view/261881</self-uri><abstract xml:lang="ru"><p>Синхронизация пространственно разобщенных процессов деления и потери клеток играет первостепенную роль в обновлении и поддержании структуры органов и тканей, но о генетических механизмах ее регуляции на данный момент известно очень немного. У растений быстрому обновлению подвержен корневой чехлик, который располагается на кончике корня, защищая от механических повреждений нишу стволовых клеток и выполняя ряд других важных функций. Несмотря на непрерывное поступление и дифференцировку дочерних клеток от деления инициалей (стволовых клеток), корневой чехлик не увеличивается в размерах благодаря регулярному удалению дифференцированных клеток на внешнем его конце. Для строгого поддержания постоянства размера корневого чехлика важно, чтобы деления стволовых клеток были синхронизированы с удалением клеток внешнего слоя. У <italic>Arabidopsis thaliana</italic>, модельного объекта генетики растений, корневой чехлик имеет очень простую упорядоченную структуру, а слущивание старых клеток происходит единым слоем, что делает этот вид удобной моделью для исследования механизмов регуляции обновления клеток корневого чехлика. В обзоре рассмотрено поддержание гомеостаза структуры и размера корневого чехлика у <italic>A. thaliana</italic>, обсуждены данные по генетическому контролю этого процесса и возможные перспективные направления дальнейших исследований в этой области.</p></abstract><trans-abstract xml:lang="en"><p/></trans-abstract><kwd-group xml:lang="ru"><kwd>Arabidopsis thaliana</kwd><kwd>дифференцировка клеток колумеллы</kwd><kwd>запрограммированная гибель клеток</kwd><kwd>инициали колумеллы</kwd><kwd>транскрипционный фактор</kwd><kwd>фитогормоны</kwd></kwd-group><funding-group><award-group><funding-source><institution-wrap><institution xml:lang="ru">Российский научный фонд</institution></institution-wrap><institution-wrap><institution xml:lang="en">Russian Science Foundation</institution></institution-wrap></funding-source><award-id>20-14-00140</award-id></award-group></funding-group></article-meta></front><body></body><back><ref-list><ref id="B1"><label>1.</label><mixed-citation>Ganesh A., Shukla V., Mohapatra A., George A. P., Bhukya D.P.N., Das K.K., Kola V.S.R., Suresh A., Ramireddy E. Root cap to soil interface: a driving force toward plant adaptation and development // Plant Cell Physiol. 2022. V. 638. P. 1038. https://doi.org/10.1093/pcp/pcac078</mixed-citation></ref><ref id="B2"><label>2.</label><mixed-citation>Arnaud C., Bonnot C., Desnos T., Nussaume L. The root cap at the forefront // C. R. Biol. 2010. V. 333. P. 335. https://doi.org/10.1016/j.crvi.2010.01.011</mixed-citation></ref><ref id="B3"><label>3.</label><mixed-citation>Dolan L., Janmaat K., Willemsen V., Linstead P., Poethig S., Roberts K., Scheres B. Cellular organisation of the Arabidopsis thaliana root // Development. 1993. V. 119. P. 71. https://doi.org/10.1242/dev.119.1.71</mixed-citation></ref><ref id="B4"><label>4.</label><mixed-citation>Fendrych M., Hautegem T.V., Durme M.V. Olvera-Carrillo Y., Huysmans M., Karimi M., Lippens S., Guérin C.J., Krebs M., Schumacher K., Nowack M.K. Programmed cell death controlled by ANAC033/SOMBRERO determines root cap organ size in Arabidopsis // Curr. Biol. 2014. V. 24. P. 931. https://doi.org/10.1016/J.CUB.2014.03.025</mixed-citation></ref><ref id="B5"><label>5.</label><mixed-citation>Bennett T., van den Toorn A., Willemsen V., Scheres B. Precise control of plant stem cell activity through parallel regulatory inputs // Development. 2014. V. 141. P. 4055. https://doi.org/10.1242/DEV.110148</mixed-citation></ref><ref id="B6"><label>6.</label><mixed-citation>Sack F.D., Kiss J.Z. Root cap structure in wild type and in a starchless mutant of Arabidopsis // Am. J. Bot. 1989. V. 76. P. 454. https://doi.org/10.1002/j.1537-2197.1989.tb11334.x</mixed-citation></ref><ref id="B7"><label>7.</label><mixed-citation>Iijima M., Morita S., Barlow P.W. Structure and function of the root cap // Plant Prod. Sci. 2008. V. 11. P. 17. https://doi.org/10.1626/pps.11.17</mixed-citation></ref><ref id="B8"><label>8.</label><mixed-citation>Maeda K., Kunieda T., Tamura K., Hatano K., Hara-Nishimura I., Shimada T. Identification of periplasmic root-cap mucilage in developing columella cells of Arabidopsis thaliana // Plant Cell Physiol. 2019. V. 60. P. 1296. https://doi.org/10.1093/pcp/pcz047</mixed-citation></ref><ref id="B9"><label>9.</label><mixed-citation>Wenzel C.L., Rost T.L. Cell division patterns of the protoderm and root cap in the “closed” root apical meristem of Arabidopsis thaliana // Protoplasma. 2001. V. 218. P. 203. https://doi.org/10.1007/BF01306609</mixed-citation></ref><ref id="B10"><label>10.</label><mixed-citation>Campilho A., Garcia B., Toorn H.V., Wijk H.V., Campilho A., Scheres B. Time-lapse analysis of stem-cell divisions in the Arabidopsis thaliana root meristem // Plant J. 2006. V. 48. P. 619. https://doi.org/10.1111/j.1365-313X.2006.02892.x</mixed-citation></ref><ref id="B11"><label>11.</label><mixed-citation>Kumpf R.P., Nowack M.K. The root cap: a short story of life and death // J. Exp. Bot. 2015. V. 66. P. 5651. https://doi.org/10.1093/JXB/ERV295</mixed-citation></ref><ref id="B12"><label>12.</label><mixed-citation>Dubreuil C., Jin X., Grönlund A., Fischer U. A Local auxin gradient regulates root cap self-renewal and size homeostasis // Curr. Biol. 2018. V. 28. P. 2581. https://doi.org/10.1016/J.CUB.2018.05.090</mixed-citation></ref><ref id="B13"><label>13.</label><mixed-citation>Wein A., Le Gac A.L., Laux T. Stem cell ageing of the root apical meristem of Arabidopsis thaliana // Mech. Ageing Dev. 2020. V. 190. P. 111313. https://doi.org/10.1016/j.mad.2020.111313</mixed-citation></ref><ref id="B14"><label>14.</label><mixed-citation>Shi C.-L., von Wangenheim D., Herrmann U., Wildhagen M., Kulik I., Kopf A., Ishida T., Olsson V., Anker M.K., Albert M., Butenko M.A., Felix G., Sawa S., Claassen M., Friml J., Aalen R.B. The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling // Nat. Plants. 2018. V. 4. P. 596. https://doi.org/10.1038/s41477-018-0212-z</mixed-citation></ref><ref id="B15"><label>15.</label><mixed-citation>Goh T., Sakamoto K., Wang P., Kozono S., Ueno K., Miyashima S., Toyokura K., Fukaki H., Kang B.-H., Nakajima K. Autophagy promotes organelle clearance and organized cell separation of living root cap cells in Arabidopsis thaliana // Development. 2022. V. 149. https://doi.org/10.1242/dev.200593</mixed-citation></ref><ref id="B16"><label>16.</label><mixed-citation>Xuan W., Band L. R., Kumpf R.P., Van Damme D., Parizot B., De Rop G., Opdenacker D., Möller B. K., Skorzinski N., Njo M.F., De Rybel В., Audenaert D., Nowack M.K., Vanneste S., Beeckman T. Cyclic programmed cell death stimulates hormone signaling and root development in Arabidopsis // Science. 2016. V. 351. P. 384. https://doi.org/10.1126/science.aad2776</mixed-citation></ref><ref id="B17"><label>17.</label><mixed-citation>Bennett T., van den Toorn A., Sanchez-Perez G.F., Campilho A., Willemsen V., Snel B., Scheres B. SOMBRERO, BEARSKIN1, and BEARSKIN2 regulate root cap maturation in Arabidopsis // The Plant Cell. 2010. V. 22. P. 640. https://doi.org/10.1105/tpc.109.072272</mixed-citation></ref><ref id="B18"><label>18.</label><mixed-citation>Willemsen V., Bauch M., Bennett T., Campilho A., Wolkenfelt H., Xu J., Haseloff J., Scheres B. The NAC domain transcription factors FEZ and SOMBRERO control the orientation of cell division plane in Arabidopsis root stem cells // Dev. Cell. 2008. V. 15. P. 913. https://doi.org/10.1016/j.devcel.2008.09.019</mixed-citation></ref><ref id="B19"><label>19.</label><mixed-citation>Hawes M.C., Brigham L.A., Wen F., Woo H.H., Zhu Y. Function of root border cells in plant health: pioneers in the rhizosphere // Annu. Rev. Phytopathol. 1998. V. 36. P. 311. https://doi.org/10.1146/annurev.phyto.36.1.311</mixed-citation></ref><ref id="B20"><label>20.</label><mixed-citation>Hawes M.C., Gunawardena U., Miyasaka S., Zhao X. The role of root border cells in plant defense // Trends Plant Sci. 2000. V. 5. P. 128. https://doi.org/10.1016/s1360-1385(00)01556-9</mixed-citation></ref><ref id="B21"><label>21.</label><mixed-citation>Vicré M., Santaella C., Blanchet S., Gateau A., Driouich, A. Root border-like cells of Arabidopsis. Microscopical characterization and role in the interaction with Rhizobacteria // Plant Physiol. 2005. V. 138. P. 998. https://doi.org/10.1104/pp.104.051813</mixed-citation></ref><ref id="B22"><label>22.</label><mixed-citation>Hawes M. C. Bengough G., Cassab G., Ponce G. Root caps and Rhizosphere // J. Plant Growth Regul. 2003. V. 21. P. 352. https://doi.org/10.1007/s00344-002-0035-y</mixed-citation></ref><ref id="B23"><label>23.</label><mixed-citation>Driouich A., Durand C., Vicré-Gibouin M. Formation and separation of root border cells // Trends Plant Sci. 2007. V. 12. P. 14.</mixed-citation></ref><ref id="B24"><label>24.</label><mixed-citation>Ding Z., Friml J. Auxin regulates distal stem cell differentiation in Arabidopsis roots // Proc. Natl. Acad. Sci. USA. 2010. V. 107. P. 12046. https://doi.org/10.1073/pnas.1000672107</mixed-citation></ref><ref id="B25"><label>25.</label><mixed-citation>Hong J.H., Chu H., Zhang C., Ghosh D., Gong X., Xu L. A quantitative analysis of stem cell homeostasis in the Arabidopsis columella root cap // Front. Plant Sci. 2015. V. 6. P. 206. https://doi.org/10.3389/fpls.2015.00206</mixed-citation></ref><ref id="B26"><label>26.</label><mixed-citation>Zazímalová E., Krecek P., Skůpa P., Hoyerová K., Petrásek J. Polar transport of the plant hormone auxin – the role of PIN-FORMED (PIN) proteins // Cell. Mol. Life Sci. 2007. V. 64. P. 1621. https://doi.org/10.1007/s00018-007-6566-4</mixed-citation></ref><ref id="B27"><label>27.</label><mixed-citation>Křeček P., Skůpa P., Libus J., Naramoto S., Tejos R., Friml J., Zažímalová E. The PIN-FORMED (PIN) protein family of auxin transporters // Genome Biol. 2009. V. 10. P. 249. https://doi.org/10.1186/gb-2009-10-12-249</mixed-citation></ref><ref id="B28"><label>28.</label><mixed-citation>Grieneisen V.A., Xu J., Marée A.F., Hogeweg P., Scheres B. Auxin transport is sufficient to generate a maximum and gradient guiding root growth // Nature. 2007. V. 449. P. 1008. https://doi.org/10.1038/nature06215</mixed-citation></ref><ref id="B29"><label>29.</label><mixed-citation>Mironova V.V., Omelyanchuk N.A., Yosiphon G., Fadeev S.I., Kolchanov N.A., Mjolsness E., Likhoshvai V.A. A plausible mechanism for auxin patterning along the developing root // BMC Syst. Biol. 2010. V. 4. P. 98. https://doi.org/10.1186/1752-0509-4-98</mixed-citation></ref><ref id="B30"><label>30.</label><mixed-citation>Swarup R., Friml J., Marchant A., Ljung K., Sandberg G., Palme K., Bennett, M. Localization of the auxin permease AUX1 suggests two functionally distinct hormone transport pathways operate in the Arabidopsis root apex // Genes Dev. 2001. V. 15. P. 2648. https://doi.org/10.1101/gad.210501</mixed-citation></ref><ref id="B31"><label>31.</label><mixed-citation>Band L.R., Wells D.M., Fozard J.A., Ghetiu T., French A.P., Pound M.P., Wilson M.H., Yu L., Li W., Hijazi H.I., Oh J., Pearce S.P., Perez-Amador M.A., Yun J., Kramer E. et al. Systems analysis of auxin transport in the Arabidopsis root apex // Plant Cell. 2014. V. 26. P. 862. https://doi.org/10.1105/tpc.113.119495</mixed-citation></ref><ref id="B32"><label>32.</label><mixed-citation>Tian H., Niu T., Yu Q., Quan T., Ding Z. Auxin gradient is crucial for the maintenance of root distal stem cell identity in Arabidopsis // Plant Signal. Behav. 2013. V. 8: e26429. https://doi.org/10.4161/psb.26429</mixed-citation></ref><ref id="B33"><label>33.</label><mixed-citation>Martin-Arevalillo R., Vernoux T. Decoding the auxin matrix: auxin biology through the eye of the computer // Annu. Rev. Plant Biol. 2023. V. 74. P. 387. https://doi.org/10.1146/annurev-arplant-102720-033523</mixed-citation></ref><ref id="B34"><label>34.</label><mixed-citation>Zhang Q., Gong M., Xu X., Li H., Deng W. Roles of auxin in the growth, development, and stress tolerance of horticultural plants // Cells. 2022. V. 11. P. 2761. https://doi.org/10.3390/cells11172761</mixed-citation></ref><ref id="B35"><label>35.</label><mixed-citation>Caumon H., Vernoux T. A matter of time: auxin signaling dynamics and the regulation of auxin responses during plant development // J. Exp. Bot. 2023. V. 74. P. 3887. https://doi.org/10.1093/jxb/erad132</mixed-citation></ref><ref id="B36"><label>36.</label><mixed-citation>Tian H., Wabnik K., Niu T., Li H., Yu Q., Pollmann S., Vanneste S., Govaerts W., Rolcík J., Geisler M., Friml J., Ding Z. WOX5-IAA17 feedback circuit-mediated cellular auxin response is crucial for the patterning of root stem cell niches in Arabidopsis // Mol. Plant. 2014. V. 7. P. 277. https://doi.org/10.1093/mp/sst118</mixed-citation></ref><ref id="B37"><label>37.</label><mixed-citation>Aida M., Beis D., Heidstra R., Willemsen V., Blilou I., Galinha C., Nussaume L., Noh Y. S., Amasino R., Scheres B. The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche // Cell. 2004. V. 119. P. 109. https://doi.org/10.1016/j.cell.2004.09.018</mixed-citation></ref><ref id="B38"><label>38.</label><mixed-citation>Blilou I., Xu J., Wildwater M., Willemsen V., Paponov I., Friml J., Heidstra R., Aida M., Palme K., Scheres B. The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots // Nature. 2005. V. 433. P. 39. https://doi.org/10.1038/nature03184</mixed-citation></ref><ref id="B39"><label>39.</label><mixed-citation>Cruz-Ramírez A., Díaz-Triviño S., Blilou I., Grieneisen V.A., Sozzani R., Zamioudis C., Miskolczi P., Nieuwland J., Benjamins R., Dhonukshe P., Caballero-Pérez J., Horvath B., Long Y., Mähönen A.P., Zhang H. et al. A bistable circuit involving SCARECROW-RETINOBLASTOMA integrates cues to inform asymmetric stem cell division // Cell. 2012. V. 150. P. 1002. https://doi.org/10.1016/j.cell.2012.07.017</mixed-citation></ref><ref id="B40"><label>40.</label><mixed-citation>Yang W., Cortijo S., Korsbo N., Roszak P., Schiessl K., Gurzadyan A., Wightman R., Jönsson H., Meyerowitz E. Molecular mechanism of cytokinin-activated cell division in Arabidopsis // Science. 2021. V. 371. P. 1350. https://doi.org/10.1126/science.abe2305</mixed-citation></ref><ref id="B41"><label>41.</label><mixed-citation>Svolacchia N., Sabatini S. Cytokinins // Curr. Biol. 2023. V. 33. P. 10. https://doi.org/10.1016/j.cub.2022.11.022.</mixed-citation></ref><ref id="B42"><label>42.</label><mixed-citation>Antoniadi I., Plačková L., Simonovik B., Doležal K., Turnbull C., Ljung K., Novák O. Cell-type-specific cytokinin distribution within the Arabidopsis primary root apex // Plant Cell. 2015. V. 27. P. 1955. https://doi.org/10.1105/tpc.15.00176</mixed-citation></ref><ref id="B43"><label>43.</label><mixed-citation>Stolz A., Riefler M., Lomin S. N., Achazi K., Romanov G.A., Schmülling, T. The specificity of cytokinin signalling in Arabidopsis thaliana is mediated by differing ligand affinities and expression profiles of the receptors // Plant J. 2011. V. 67. P. 157. https://doi.org/10.1111/j.1365-313X.2011.04584.x</mixed-citation></ref><ref id="B44"><label>44.</label><mixed-citation>Tsilimigka F., Poulios S., Mallioura A., Vlachonasios K. ADA2b and GCN5 affect cytokinin signaling by modulating histone acetylation and gene expression during root growth of Arabidopsis thaliana // Plants. 2022. V. 11. P. 1335. https://doi.org/10.3390/plants11101335</mixed-citation></ref><ref id="B45"><label>45.</label><mixed-citation>Antoniadi I., Novák O., Gelová Z., Johnson A., Plíhal ., Simerský R., Mik V., Vain T., Mateo-Bonmatí E., Karady M., Pernisova M., Plačková L., Opassathian K., Hejátko J., Friml J. et al. Cell-surface receptors enable perception of extracellular cytokinins // Nat. Commun. 2020. V. 11. P. 4284. https://doi.org/10.1101/726125</mixed-citation></ref><ref id="B46"><label>46.</label><mixed-citation>Di Mambro R., Svolacchia N., Ioio R. D., Pierdonati E., Salvi E., Pedrazzini E., Vitale A., Perilli S., Sozzani R., Benfey P. N., Busch W., Costantino P., Sabatini S. The lateral root cap acts as an auxin sink that controls meristem size // Curr. Biol. 2019. V. 29. P. 1199. https://doi.org/10.1016/j.cub.2019.02.022</mixed-citation></ref><ref id="B47"><label>47.</label><mixed-citation>Wang Z., Rong D., Chen D., Xiao Y., Liu R., Wu S., Yamamuro C. Salicylic acid promotes quiescent center cell division through ROS accumulation and down-regulation of PLT1, PLT2, and WOX5 // J. Integr. Plant Biol. 2021. V. 63. P. 583. https://doi.org/10.1111/jipb.13020</mixed-citation></ref><ref id="B48"><label>48.</label><mixed-citation>Pasternak T., Groot E.P., Kazantsev F.V., Teale W., Omelyanchuk N., Kovrizhnykh V., Palme K., Mironova V.V. Salicylic acid affects root meristem patterning via auxin distribution in a concentration-dependent manner // Plant Physiol. 2019. V. 180. P. 1725. https://doi.org/10.1104/pp.19.00130</mixed-citation></ref><ref id="B49"><label>49.</label><mixed-citation>Ke M., Ma Z., Wang D., Sun Y., Wen C., Huang D., Chen Z., Yang L., Tan S., Li R., Friml J., Miao Y., Chen X. Salicylic acid regulates PIN2 auxin transporter hyperclustering and root gravitropic growth via Remorin-dependent lipid nanodomain organisation in Arabidopsis thaliana // New Phytol. 2021. V. 229. P. 963. https://doi.org/10.1111/nph.16915</mixed-citation></ref><ref id="B50"><label>50.</label><mixed-citation>Armengot L., Marquès-Bueno M.M., Soria-Garcia A., Müller M., Munné-Bosch S., Martínez M.C. Functional interplay between protein kinase CK 2 and salicylic acid sustains PIN transcriptional expression and root development // Plant J. 2014. V. 78. P. 411. https://doi.org/10.1111/tpj.12481</mixed-citation></ref><ref id="B51"><label>51.</label><mixed-citation>Gonzalez-García M.P., Vilarrasa-Blasi J., Zhiponova M., Divol F., Mora-García S., Russinova E., Caño-Delgado A.I. Brassinosteroids control meristem size by promoting cell cycle progression in Arabidopsis roots // Development. 2011. V. 138. P. 849. https://doi.org/10.1242/dev.057331</mixed-citation></ref><ref id="B52"><label>52.</label><mixed-citation>Lee H.S., Kim Y., Pham G., Kim J.W., Song J.H., Lee Y., Hwang Y.-S., Roux S.J., Kim S.H. Brassinazole resistant 1 (BZR1)-dependent brassinosteroid signalling pathway leads to ectopic activation of quiescent cell division and suppresses columella stem cell differentiation // J. Exp. Bot. 2015. V. 66. P. 4835. https://doi.org/10.1093/jxb/erv316</mixed-citation></ref><ref id="B53"><label>53.</label><mixed-citation>Wei Z., Li J. Brassinosteroids regulate root growth, development, and symbiosis // Mol. Plant. 2016. V. 9. P. 86. https://doi.org/10.1016/j.molp.2015.12.00</mixed-citation></ref><ref id="B54"><label>54.</label><mixed-citation>Chen Q., Sun J., Zhai Q., Zhou W., Qi L., Xu L., Wang B., Chen R., Jiang H., Qi J., Li X., Palme K., Li C. The basic helix-loop-helix transcription factor MYC2 directly represses PLETHORA expression during jasmonate-mediated modulation of the root stem cell niche in Arabidopsis // Plant Cell. 2011. V. 23. P. 3335. https://doi.org/10.1105/tpc.111.089870</mixed-citation></ref><ref id="B55"><label>55.</label><mixed-citation>Christmann A., Hoffmann T., Teplova I., Grill E., Muller A. Generation of active pools of abscisic acid revealed by in vivo imaging of water-stressed Arabidopsis // Plant Physiol. 2005. V. 137. P. 209. https://doi.org/10.1104/pp.104.053082</mixed-citation></ref><ref id="B56"><label>56.</label><mixed-citation>Zhang H., Han W., De Smet I., Talboys P., Loya R., Hassan A., Rong H., Jürgens G., Knox J.P., Wang M.H. ABA promotes quiescence of the quiescent centre and suppresses stem cell differentiation in the Arabidopsis primary root meristem // Plant J. 2010. V. 64. P. 764. https://doi.org/10.1111/j.1365-313X.2010.04367.x</mixed-citation></ref><ref id="B57"><label>57.</label><mixed-citation>Sarkar A.K., Luijten M., Miyashima S., Lenhard M., Hashimoto T., Nakajima K., Sheres B., Heidstra R., Laux T. Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers // Nature. 2007. V. 446. P. 811. https://doi.org/10.1038/nature05703</mixed-citation></ref><ref id="B58"><label>58.</label><mixed-citation>Hardtke C.S., Berleth T. The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development // EMBO J. 1998. V. 17. P. 1405. https://doi.org/10.1093/emboj/17.5.1405</mixed-citation></ref><ref id="B59"><label>59.</label><mixed-citation>Tsuchisaka A., Theologis A. Unique and overlapping expression patterns among the Arabidopsis 1-amino-cyclopropane-1-carboxylate synthase gene family members // Plant Physiol. 2004. V. 136. P. 2982. https://doi.org/10.1104/pp.104.049999</mixed-citation></ref><ref id="B60"><label>60.</label><mixed-citation>Swarup R., Perry P., Hagenbeek D., Van Der Straeten D., Beemster G.T., Sandberg G., Bhalerao R., Ljung K., Bennett M. J. Ethylene upregulates auxin biosynthesis in Arabidopsis seedlings to enhance inhibition of root cell elongation // Plant Cell. 2007. V. 19. P. 2186. https://doi.org/10.1105/tpc.107.052100</mixed-citation></ref><ref id="B61"><label>61.</label><mixed-citation>Li G., Zhu C., Gan L., Ng D., Xia K. GA 3 enhances root responsiveness to exogenous IAA by modulating auxin transport and signalling in Arabidopsis // Plant Cell Rep. 2015. V. 34. P. 483. https://doi.org/10.1007/s00299-014-1728-y</mixed-citation></ref><ref id="B62"><label>62.</label><mixed-citation>Forzani C., Aichinger E., Sornay E., Willemsen V., Laux T., Dewitte W., Murray J.A. WOX5 suppresses CYCLIN D activity to establish quiescence at the center of the root stem cell niche // Curr. Biol. 2014. V. 24. P. 1939. https://doi.org/10.1016/j.cub.2014.07.019.</mixed-citation></ref><ref id="B63"><label>63.</label><mixed-citation>Berckmans B., Kirschner G., Gerlitz N., Stadler R., Simon R. CLE40 signaling regulates root stem cell fate // Plant Physiol. 2020 V. 182. P. 1776. https://doi.org/10.1104/pp.19.00914</mixed-citation></ref><ref id="B64"><label>64.</label><mixed-citation>Pi L., Aichinger E., van der Graaff E., Llavata-Peris C.I., Weijers D., Hennig L., Groot E., Laux T. Organizer-derived WOX5 signal maintains root columella stem cells through chromatin-mediated repression of CDF4 expression // Dev. Cell. 2015. V. 33. P. 576. https://doi.org/10.1016/j.devcel.2015.04.024</mixed-citation></ref><ref id="B65"><label>65.</label><mixed-citation>Stahl Y., Wink R.H., Ingram G.C., Simon R. A signaling module controlling the stem cell niche in Arabidopsis root meristems // Curr. Biol. 2009. V. 19. P. 909. https://doi.org/10.1016/j.cub.2009.03.060</mixed-citation></ref><ref id="B66"><label>66.</label><mixed-citation>Zhang L., Yang Y., Mu C., Liu M., Ishida T., Sawa S., Zhu Y., Pi L. Control of root stem cell differentiation and lateral root emergence by CLE16/17 peptides in Arabidopsis // Front. Plant Sci. 2022. V. 13. P. 869888. https://doi.org/10.3389/fpls.2022.869888</mixed-citation></ref><ref id="B67"><label>67.</label><mixed-citation>Stahl Y., Grabowski S., Bleckmann A., Kühnemuth R., Weidtkamp-Peters S., Pinto K.G., Kirschner G.K., Schmid J.B., Wink R.H., Hülsewede A., Felekyan S., Seidel C.A., Simon R. Moderation of Arabidopsis root stemness by CLAVATA1 and ARABIDOPSIS CRINKLY4 receptor kinase complexes // Curr. Biol. 2013. V. 23. P. 362. https://doi.org/10.1016/j.cub.2013.01.045</mixed-citation></ref><ref id="B68"><label>68.</label><mixed-citation>Yue K., Sandal P., Williams E. L., Murphy E., Stes E., Nikonorova N., Ramakrishna P., Czyzewicz N., Montero-Morales L., Kumpf R., Lin Z., van de Cotte B., Iqbal M., Van Bel M., Van De Slijke E. et al. PP2A-3 interacts with ACR4 and regulates formative cell division in the Arabidopsis root // Proc. Natl. Acad. Sci. USA. 2016. V. 113. P. 1447. https://doi.org/10.1073/pnas.1525122113</mixed-citation></ref><ref id="B69"><label>69.</label><mixed-citation>Kinoshita A., ten Hove C. A., Tabata R., Yamada M., Shimizu N., Ishida T., Yamaguchi K., Shigenobu S., Takebayashi Y., Iuchi S, Kobayashi M., Kurata T., Wada T., Seo M., Hasebe M. A plant U-box protein, PUB4, regulates asymmetric cell division and cell proliferation in the root meristem // Development. 2015. V. 142. P. 444. https://doi.org/10.1242/dev.113167</mixed-citation></ref><ref id="B70"><label>70.</label><mixed-citation>Wang J.W., Wang L.J., Mao Y.B., Cai W.J., Xue H.W., Chen X.Y. Control of root cap formation by microRNA-targeted auxin response factors in Arabidopsis // Plant Cell. 2005. V. 17. P. 2204. https://doi.org/10.1105/TPC.105.033076</mixed-citation></ref><ref id="B71"><label>71.</label><mixed-citation>Ornelas‐Ayala D., Vega‐León R., Petrone‐Mendoza E., Garay‐Arroyo A., García‐Ponce B., Álvarez‐Buylla E.R., Sanchez M.D.L.P. ULTRAPETALA1 maintains Arabidopsis root stem cell niche independently of ARABIDOPSIS TRITHORAX1 // New Phytol. 2020. V. 225. P. 1261. https://doi.org/10.1111/nph.16213</mixed-citation></ref><ref id="B72"><label>72.</label><mixed-citation>Wildwater M., Campilho A., Perez-Perez J.M., Heidstra R., Blilou I., Korthout H., Chatterjee J., Mariconti L., Gruissem W., Scheres B. The RETINOBLASTOMA-RELATED gene regulates stem cell maintenance in Arabidopsis roots // Cell. 2005. V. 123. P. 1337. https://doi.org/10.1016/j.cell.2005.09.042</mixed-citation></ref><ref id="B73"><label>73.</label><mixed-citation>Kawakatsu T., Stuart T., Valdes M., Breakfield N., Schmitz R.J., Nery J.R., Mark A.U. Han X. Benfey P.N., Ecker J.R. Unique cell-type-specific patterns of DNA methylation in the root meristem // Nat. Plants. 2016. V. 2. P. 16058. https://doi.org/10.1038/nplants.2016.58</mixed-citation></ref><ref id="B74"><label>74.</label><mixed-citation>Kornet N., Scheres B. Members of the GCN5 histone acetyltransferase complex regulate PLETHORA-mediated root stem cell niche maintenance and transit amplifying cell proliferation in Arabidopsis // Plant Cell. 2009. V. 21. P. 1070. https://doi.org/10.1105/tpc.108.065300</mixed-citation></ref><ref id="B75"><label>75.</label><mixed-citation>Ngo A.H., Kanehara K., Nakamura Y. Non‐specific phospholipases C, NPC2 and NPC6, are required for root growth in Arabidopsis // Plant J. 2019. V. 100. P. 825. https://doi.org/10.1111/tpj.14494</mixed-citation></ref><ref id="B76"><label>76.</label><mixed-citation>Lin Y.C., Kobayashi K., Wada H., Nakamura Y. Phosphatidylglycerophosphate phosphatase is required for root growth in Arabidopsis // Biochim. Biophys. Acta, Mol. Cell Biol. Lipids. 2018. V. 1863. P. 563. https://doi.org/10.1016/j.bbalip.2018.02.007</mixed-citation></ref><ref id="B77"><label>77.</label><mixed-citation>Begum T., Reuter R., Schöffl F. Overexpression of AtHsfB4 induces specific effects on root development of Arabidopsis // Mech. Dev. 2013. V. 130. P. 54. https://doi.org/10.1016/j.mod.2012.05.008</mixed-citation></ref><ref id="B78"><label>78.</label><mixed-citation>Cnops G., Wang X., Linstead P., Montagu M.V., Lijsebettens M.V., Dolan L. Tornado1 and tornado2 are required for the specification of radial and circumferential pattern in the Arabidopsis root // Development. 2000. V. 127. P. 3385. https://doi.org/10.1242/dev.127.15.3385</mixed-citation></ref><ref id="B79"><label>79.</label><mixed-citation>Galinha C., Hofhuis H., Luijten M., Willemsen V., Blilou I., Heidstra R., Scheres B. PLETHORA proteins as dose-dependent master regulators of Arabidopsis root development // Nature. 2007. V. 449. P. 1053. https://doi.org/10.1038/nature06206</mixed-citation></ref><ref id="B80"><label>80.</label><mixed-citation>Ercoli M.F., Ferela A., Debernardi J.M., Perrone A.P., Rodriguez R.E., Palatnik J.F. GIF transcriptional coregulators control root meristem homeostasis // Plant Cell. 2018. V. 30. P. 347. https://doi.org/10.1105/tpc.17.00856</mixed-citation></ref><ref id="B81"><label>81.</label><mixed-citation>Olvera-Carrillo Y., Van Bel M., Van Hautegem T., Fendrych M., Huysmans M., Simaskova M., van Durme M., Buscaill P., Rivas S., Coll N.S., Coppens F., Maere S., Nowack M.K. A Conserved core of programmed cell death indicator genes discriminates developmentally and environmentally induced programmed cell death in plants // Plant Physiol. 2015. V. 169. P. 2684. https://doi.org/10.1104/pp.15.00769</mixed-citation></ref><ref id="B82"><label>82.</label><mixed-citation>Huysmans M., Buono R.A., Skorzinski N., Radio M.C., De Winter F., Parizot B., Mertens J., Karimi M., Fendrych M., Nowack M.K. NAC transcription factors ANAC087 and ANAC046 control distinct aspects of programmed cell death in the Arabidopsis columella and lateral root cap // Plant Cell. 2018. V. 30. P. 2197. https://doi.org/10.1105/tpc.18.00293</mixed-citation></ref><ref id="B83"><label>83.</label><mixed-citation>Shimamura R., Ohashi Y., Taniguchi Y.Y., Kato M., Tsuge T., Aoyama T. Arabidopsis PLDζ1 and PLDζ2 localize to post-Golgi membrane compartments in a partially overlapping manner // Plant Mol. Biol. 2022. V. 108. P. 31. https://doi.org/10.1007/s11103-021-01205-0</mixed-citation></ref><ref id="B84"><label>84.</label><mixed-citation>Møller S.G., McPherson M.J. Developmental expression and biochemical analysis of the Arabidopsis atao1 gene encoding an H2O2-generating diamine oxidase // Plant J. 1998. V. 13. P. 781. https://doi.org/10.1046/j.1365-313x.1998.00080.x</mixed-citation></ref><ref id="B85"><label>85.</label><mixed-citation>Feng Q., Cubría-Radío M., Vavrdová T., De Winter F., Schilling N., Huysmans M., Nanda A.K., Melnyk C.W., Nowack M.K. Repressive ZINC FINGER OF ARABIDOPSIS THALIANA proteins promote programmed cell death in the Arabidopsis columella root cap // Plant Physiol. 2023. V. 192. P. 1151. https://doi.org/10.1093/plphys/kiad130</mixed-citation></ref><ref id="B86"><label>86.</label><mixed-citation>Durand C., Vicré-Gibouin M., Follet-Gueye M.L., Duponchel L., Moreau M., Lerouge P., Driouich A. The organization pattern of root border-like cells of Arabidopsis is dependent on cell wall homogalacturonan // Plant Physiol. 2009. V. 150. P. 1411. https://doi.org/10.1104/pp.109.136382</mixed-citation></ref><ref id="B87"><label>87.</label><mixed-citation>Kamiya M., Higashio S.-Y., Isomoto A., Kim J.-M., Seki M., Miyashima S., Nakajima K. Control of root cap maturation and cell detachment by BEARSKIN transcription factors in Arabidopsis // Development. 2016. V. 143. P. 4063. https://doi.org/10.1242/dev.142331</mixed-citation></ref><ref id="B88"><label>88.</label><mixed-citation>Karve R., Suárez-Román F., Iyer-Pascuzzi A.S. The transcription factor NIN-LIKE PROTEIN7 controls border-like cell release // Plant Physiol. 2016. V. 171. P. 2101. https://doi.org/10.1104/pp.16.00453</mixed-citation></ref><ref id="B89"><label>89.</label><mixed-citation>Feng Q., Rycke R. D., Dagdas Y., Nowack M.K. Autophagy promotes programmed cell death and corpse clearance in specific cell types of the Arabidopsis root cap // Curr. Biol. 2022. V. 32. P. 4548. https://doi.org/10.1016/j.cub.2022.03.053</mixed-citation></ref></ref-list></back></article>
